RNA id: CI01000013_07804879_07805627.mRNA


Basic Information

Item Value
RNA id CI01000013_07804879_07805627.mRNA
length 411
RNA type mRNA
GC content 0.49
exon number 2
gene id CI01000013_07804879_07805627
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 7804866 ~ 7805665 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAGGTGCTGAGACTATTACTTGAGCATCAATGCGAGCATGTCAGGATCATGCGAGCGTCAAAGAAGAAACCCCCCCTATAAATCTATTGGTGGTGGACTCCAATGCTCTGCTCACGAGGCTGCAGTTCTATTTGGGAAGTTGGCAGCTCGAGGCAGAGGGGCTTTACTCTCGCGACTCTGGAATTATGAACAGCGCTGGTCCGAGCATCTCGTTTTGAACATTATTCCCACTTATCTGAGACCATGGAGTTCGGAACCCGCATTTTCATCGCATTCCTCGTTTCCCAGCTCTGAAGTTGAGCGCTCCTTTGGCTCCCTTCATCAGGAGACATTCACACGACGGGCTGACTCACGGAGCCCTTCTCCATTCACTAAAGACAGCAAAGTCAGTAAATAAGCGAACAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94662 lncRNA downstream 5912 7773631 ~ 7798954 (-) True G83212
TU94768 lncRNA downstream 278068 7521782 ~ 7526798 (-) True G83318
TU94751 lncRNA downstream 285319 7471754 ~ 7519547 (-) True G83301
TU94730 lncRNA downstream 361567 7442899 ~ 7443299 (-) True G83280
TU94735 lncRNA downstream 366109 7438226 ~ 7438757 (-) True G83285
TU94846 lncRNA upstream 13489 7819154 ~ 7819365 (-) True G83393
TU94848 lncRNA upstream 16035 7821700 ~ 7822011 (-) True G83395
TU94661 lncRNA upstream 63105 7868770 ~ 7900168 (-) True G83211
TU94937 lncRNA upstream 151297 7956962 ~ 7958056 (-) True G83475
TU94939 lncRNA upstream 167075 7972740 ~ 7974429 (-) True G83477
CI01000013_07703864_07718313.mRNA mRNA downstream 85793 7703761 ~ 7719073 (-) True CI01000013_07703864_07718313
CI01000013_07641497_07662151.mRNA mRNA downstream 141119 7640917 ~ 7663747 (-) True CI01000013_07641497_07662151
CI01000013_07463570_07636742.mRNA mRNA downstream 168124 7463570 ~ 7636742 (-) True CI01000013_07463570_07636742
CI01000013_07455026_07456463.mRNA mRNA downstream 348360 7454241 ~ 7456506 (-) True CI01000013_07455026_07456463
CI01000013_07339918_07367774.mRNA mRNA downstream 437092 7339731 ~ 7367774 (-) False CI01000013_07339918_07367774
CI01000013_07989784_08013498.mRNA mRNA upstream 184046 7989711 ~ 8013936 (-) True CI01000013_07989784_08013498
CI01000013_08016159_08020344.mRNA mRNA upstream 210450 8016115 ~ 8020344 (-) True CI01000013_08016159_08020344
CI01000013_08042921_08047883.mRNA mRNA upstream 236545 8042210 ~ 8048460 (-) True CI01000013_08042921_08047883
CI01000013_08059677_08060143.mRNA mRNA upstream 253303 8058968 ~ 8060143 (-) True CI01000013_08059677_08060143
CI01000013_08072726_08076570.mRNA mRNA upstream 266914 8072579 ~ 8077191 (-) True CI01000013_08072726_08076570
TU94655 other downstream 422506 7380297 ~ 7382360 (-) True G83206
TU94120 other downstream 1920494 5884149 ~ 5884372 (-) True G82727
TU92796 other downstream 2060828 5739526 ~ 5744038 (-) True G81547
TU92232 other downstream 3054305 4748809 ~ 4750561 (-) True G81032
TU92144 other downstream 3245963 4556868 ~ 4558903 (-) False G80954
TU95233 other upstream 1501371 9307036 ~ 9322844 (-) True CI01000013_09309438_09335834
TU96930 other upstream 2674196 10479861 ~ 10480700 (-) True G85170
TU96941 other upstream 2757794 10572377 ~ 10572440 (-) True G85180
TU96958 other upstream 2786539 10592204 ~ 10595337 (-) True G85188
TU97193 other upstream 3229367 11035032 ~ 11035466 (-) True G85401

Expression Profile