RNA id: CI01000013_09444914_09445539.mRNA



Basic Information


Item Value
RNA id CI01000013_09444914_09445539.mRNA
length 2025
RNA type mRNA
GC content 0.37
exon number 2
gene id CI01000013_09444914_09445539
representative True

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9444425 ~ 9446553 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATACAATCCTCACATCTCAAAGGTAAGTCCCCTTCGCTCGCTCTCTCTCTCTACTCATCACTACTCTCACACTATCTGCAGCTCTGAGCACTGGCATTCTCGCTAATAATGTGTGACTTTGTCATCTAATTTTTATAGCCTTTTAAAAGGGTATTTTTATTATTTATATTATAGAGAAACTAAGTTTTACATTCAAACACGGAATAAAAAAAAATTAGAGTGCTTTTGGAATGAAGCAATCATTGTTTATACAAGGGCAACATGTTCTTTGGGGAATTTACCAGATATTGAAATCCAAATGTAGGCACAGAGGCTGTCATTTTGTTCATTTAGAAGTGAGACTGAACATAGCAGAAGTCTTAATTGCTTGATGTTGCAGACTGGAGAGGCCTGGGGTTCACTGACACGCTCATTGTTAAGACTATAGGCAACATCACATTAGAGTTCTCTTAGATGTATTTCCATGTGCAAGGAACCCTCTTTTAAATGTATTTTGTTGGACAAACTGTTCTTAATTTGAATTAGCAGTATGACTTTAGAGGATCTGATATCGGAGATTAAATGTCATGTACGATTGACTGAAATATCAAGCCTGGATTGCAAGATTGTGCAATGATTAGACAGAGCTTCAATGATTTACAGTTTTTCAATAGAAAATACCCTTTGTTAATTGAATTTACTACAAGTGATTTCTTAATGCAGTTTGGGAGAATGTGAAAATGGAAGAATGAAGCTTTTCGCCAATAAATTGCACTCAGGAATGCAGATATAGTTGCACTTTCTTTCAGTAGGAGCCAGTTAGTTTCTTGAGCACCAAATCAGCATATGGAATGATTTCTGAAGATTCAACTTTGCCATAACAGGAATAAATGAACTGTATTTCTAATCAAATAAATTCAGCCTTGATAAACAGTTACATTTAAAAGATTTTTAGTAGACATTCAGAATAATGCTTATTTTATTTCAGCAGGTATTGCAGTATTGCCAAGATAAAGACCACCATATACAAGAACCATGTATTCTCCAGTTCTTCTCTACACCTGCTTTTTGAGCATTCTTGGTATGATTGATGGCCGTTCGATCCCTATTCATCAGGATAACCTCAAAAACTTGGTCAAACTACAGGCAGACACCATCATCCACAGAATTAAGGAACACAATGAGAAGCTAAAACTGTCTCCAAAGATCCTCATTGGGGATTCAGAGCTTTACCCCGAGGTTCCTGCTGATAAACCTATCCAAGGGCTTGGGTCCATCGTGGACACCCTAACTACCTTCCAGAAGATTCTTCAAACACTGCCCAAGGGGCATGTGAGCCAGTTACACAATGATATGTCCACCCTTTTGGAATACTTTAAAGACAGGATGACATTTATGCGTTGCACACTAAAGGAGCCAGCCAATGGGAAGTCACTGGACACTTTCATAGAGAAGAACGCCACCCACCACATTACTTTTGGGTACATGGCTTTAGACAGACTGAAACAGTTCATGCAAAAGCTGATAGCTAATCTTGACCAGTTGAAGAGCTGCTAATCTGCCACTATTATAGCATTACGGTATACTATTTATTATATTTATTTAAAACCCTGTATATTTATAGACCAAAGTATTTTTTGGCACATTTTAATGTACAAACAAATTTAAAAATTATTTCCTGCTATTAAACAGAAAGCCAGAAATGTTGCTTGCGACATCATGGTGCGCCAATCAATTTGTCCTTACGATGTAAACAAACACTAGCAATCTGATACCTGCACACATTGCCATGTCATACTTCATGCTGTTTGCAGGATGACATCAGCACTTGCTGCGCTTGCTCAATGATGTCACTGTTTACCAGAAGCAGCGAGGTCAGACTCTGCTGGGAAGCTGGAATTATGTTCCCACTTCTTGCTGCAACACCAGCAATGTAGGACACACACCAAAATATATATATATTTTCCTACACAGTTTGAATCTATGCACTTTAAATATCCTGTGATTGTAAATAGTTTTGTATTTGTATTTTTCCATAAAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95425 lncRNA downstream 4509 9439441 ~ 9439916 (-) True G83888
TU95434 lncRNA downstream 46849 9397286 ~ 9397576 (-) True G83894
TU95281 lncRNA downstream 64802 9311397 ~ 9379623 (-) True G83752
TU95293 lncRNA downstream 199787 9244239 ~ 9244638 (-) True G83764
TU95419 lncRNA downstream 215753 9227965 ~ 9228672 (-) True G83885
TU95431 lncRNA upstream 5898 9452451 ~ 9460153 (-) True G83891
TU95468 lncRNA upstream 42014 9488567 ~ 9488806 (-) True G83921
TU95489 lncRNA upstream 62972 9509525 ~ 9509951 (-) True G83942
TU95496 lncRNA upstream 74169 9520722 ~ 9520935 (-) True G83949
TU95503 lncRNA upstream 91919 9538472 ~ 9539609 (-) False G83956
CI01000013_09336832_09367107.mRNA mRNA downstream 77121 9336572 ~ 9367304 (-) True CI01000013_09336832_09367107
CI01000013_09309438_09335834.mRNA mRNA downstream 108348 9309372 ~ 9336077 (-) False CI01000013_09309438_09335834
CI01000013_09293519_09305846.mRNA mRNA downstream 138579 9293133 ~ 9305846 (-) True CI01000013_09293519_09305846
CI01000013_09007324_09008538.mRNA mRNA downstream 435676 9007257 ~ 9008749 (-) True CI01000013_09007324_09008538
CI01000013_08950324_08962808.mRNA mRNA downstream 481617 8949978 ~ 8962808 (-) True CI01000013_08950324_08962808
CI01000013_09734984_09737488.mRNA mRNA upstream 288334 9734887 ~ 9737488 (-) True CI01000013_09734984_09737488
CI01000013_09828630_09852321.mRNA mRNA upstream 380576 9827129 ~ 9852321 (-) True CI01000013_09828630_09852321
CI01000013_09930834_10008344.mRNA mRNA upstream 483984 9930537 ~ 10008506 (-) True CI01000013_09930834_10008344
CI01000013_10014588_10020597.mRNA mRNA upstream 567832 10014385 ~ 10020597 (-) True CI01000013_10014588_10020597
CI01000013_10037048_10083444.mRNA mRNA upstream 590495 10037048 ~ 10083444 (-) True CI01000013_10037048_10083444
TU95233 other downstream 121581 9307036 ~ 9322844 (-) True CI01000013_09309438_09335834
TU94655 other downstream 2062065 7380297 ~ 7382360 (-) True G83206
TU94120 other downstream 3560053 5884149 ~ 5884372 (-) True G82727
TU92796 other downstream 3700387 5739526 ~ 5744038 (-) True G81547
TU92232 other downstream 4693864 4748809 ~ 4750561 (-) True G81032
TU96930 other upstream 1033308 10479861 ~ 10480700 (-) True G85170
TU96941 other upstream 1116906 10572377 ~ 10572440 (-) True G85180
TU96958 other upstream 1145651 10592204 ~ 10595337 (-) True G85188
TU97193 other upstream 1588479 11035032 ~ 11035466 (-) True G85401
TU97461 other upstream 2152507 11600778 ~ 11600941 (-) True G85628

Expression Profile