RNA id: TU91995


Basic Information

Item Value
RNA id TU91995
length 248
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G80818
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4530368 ~ 4530615 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTAATAATACGCTAAAGCCCGGCGGCACGTTGATGTGATTGGTTACAAGGTAGTTTGTGATGTCAGAAACATCAGCGATTTGAAACCGCGGGTTTGAGACTGTCTTTGGTTTACGGCAGTTTTAAAGAGAAAATACTCAGCAGTGGTGTTGACTTATGAATTTGCACATGGTTTGGCTTAAAGCATATTAAAAACACCAGATAGACATATAAACAACATTAAAAACTTGATTTTCACCACAGGGGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91994 lncRNA upstream 4719 4525377 ~ 4525649 (+) True G80817
TU91992 lncRNA upstream 7717 4522418 ~ 4522651 (+) True G80815
TU91991 lncRNA upstream 8922 4521208 ~ 4521446 (+) True G80814
TU91989 lncRNA upstream 13000 4517155 ~ 4517368 (+) True G80812
TU91952 lncRNA upstream 67347 4462755 ~ 4463021 (+) True G80775
TU92006 lncRNA downstream 32622 4563237 ~ 4564657 (+) True G80828
TU92005 lncRNA downstream 34550 4565165 ~ 4565347 (+) True G80827
TU92007 lncRNA downstream 36143 4566758 ~ 4567003 (+) True G80829
TU92008 lncRNA downstream 40583 4571198 ~ 4571553 (+) True G80830
TU92009 lncRNA downstream 41149 4571764 ~ 4572100 (+) True G80831
CI01000013_04505188_04527744.mRNA mRNA upstream 2496 4505145 ~ 4527872 (+) True CI01000013_04505188_04527744
CI01000013_04425884_04426805.mRNA mRNA upstream 103358 4425748 ~ 4427010 (+) True CI01000013_04425884_04426805
CI01000013_04344339_04347938.mRNA mRNA upstream 182285 4344339 ~ 4348083 (+) True CI01000013_04344339_04347938
CI01000013_04316134_04317091.mRNA mRNA upstream 213170 4316134 ~ 4317198 (+) True CI01000013_04316134_04317091
CI01000013_04084679_04088148.mRNA mRNA upstream 440746 4083814 ~ 4089622 (+) False CI01000013_04084679_04088148
CI01000013_04542059_04550082.mRNA mRNA downstream 11444 4542059 ~ 4550307 (+) True CI01000013_04542059_04550082
CI01000013_04612468_04618550.mRNA mRNA downstream 81439 4612054 ~ 4619000 (+) True CI01000013_04612468_04618550
CI01000013_04657029_04672057.mRNA mRNA downstream 126188 4656803 ~ 4672742 (+) True CI01000013_04657029_04672057
CI01000013_04673313_04707104.mRNA mRNA downstream 142601 4673216 ~ 4707470 (+) True CI01000013_04673313_04707104
CI01000013_04720501_04724747.mRNA mRNA downstream 189886 4720501 ~ 4724940 (+) True CI01000013_04720501_04724747
TU91262 other upstream 464539 4064933 ~ 4065829 (+) True CI01000013_04051081_04064651
TU91155 other upstream 945584 3584008 ~ 3584784 (+) True G80062
TU90328 other upstream 2063197 2466765 ~ 2467171 (+) True G79309
TU88574 other upstream 3577399 946521 ~ 952969 (+) True G77695
TU88411 other upstream 3820819 708833 ~ 709549 (+) True G77533
TU92027 other downstream 304463 4835078 ~ 4836232 (+) True G80845
TU92951 other downstream 1525683 6056662 ~ 6056782 (+) True G81681
TU92936 other downstream 1547947 6079666 ~ 6082367 (+) True G81666
TU93312 other downstream 2805330 7335945 ~ 7338239 (+) True G81994
TU93521 other downstream 3497723 8028338 ~ 8041343 (+) True G82168

Expression Profile