RNA id: TU95619



Basic Information


Item Value
RNA id TU95619
length 204
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G84049
representative True

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9626047 ~ 9626250 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTGTGTCTATGTATTTTAAACATTTGAATGGACTGATAAAGGGAGCTGTAAAGTATTTTTGTTGAAGTACAATGTCATTTTGACCATAATAATGTGCCAAATCTAACTCATATAAATATTACAGTAGTATAGAAAAATATTATACATACATTTATAGGTAAAATCGAACTCTGAGCCTCCTGTACCCATTCTGTGACGTCAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95618 lncRNA downstream 285 9625528 ~ 9625762 (-) True G84048
TU95559 lncRNA downstream 23803 9601777 ~ 9602244 (-) True G84006
TU95548 lncRNA downstream 43814 9582003 ~ 9582233 (-) True G83998
TU95546 lncRNA downstream 51885 9573762 ~ 9574162 (-) True G83996
TU95540 lncRNA downstream 62657 9563040 ~ 9563390 (-) True G83990
TU95634 lncRNA upstream 33175 9659425 ~ 9659737 (-) True G84064
TU96715 lncRNA upstream 159798 9786048 ~ 9786278 (-) True G84957
TU96720 lncRNA upstream 172222 9798472 ~ 9798676 (-) True G84962
TU96732 lncRNA upstream 237150 9863400 ~ 9863621 (-) True G84974
TU96734 lncRNA upstream 240091 9866341 ~ 9866832 (-) True G84976
CI01000013_09444914_09445539.mRNA mRNA downstream 179494 9444425 ~ 9446553 (-) True CI01000013_09444914_09445539
CI01000013_09336832_09367107.mRNA mRNA downstream 258743 9336572 ~ 9367304 (-) True CI01000013_09336832_09367107
CI01000013_09309438_09335834.mRNA mRNA downstream 289970 9309372 ~ 9336077 (-) False CI01000013_09309438_09335834
CI01000013_09293519_09305846.mRNA mRNA downstream 320201 9293133 ~ 9305846 (-) True CI01000013_09293519_09305846
CI01000013_09007324_09008538.mRNA mRNA downstream 617298 9007257 ~ 9008749 (-) True CI01000013_09007324_09008538
CI01000013_09734984_09737488.mRNA mRNA upstream 108637 9734887 ~ 9737488 (-) True CI01000013_09734984_09737488
CI01000013_09828630_09852321.mRNA mRNA upstream 200879 9827129 ~ 9852321 (-) True CI01000013_09828630_09852321
CI01000013_09930834_10008344.mRNA mRNA upstream 304287 9930537 ~ 10008506 (-) True CI01000013_09930834_10008344
CI01000013_10014588_10020597.mRNA mRNA upstream 388135 10014385 ~ 10020597 (-) True CI01000013_10014588_10020597
CI01000013_10037048_10083444.mRNA mRNA upstream 410798 10037048 ~ 10083444 (-) True CI01000013_10037048_10083444
TU95233 other downstream 303203 9307036 ~ 9322844 (-) True CI01000013_09309438_09335834
TU94655 other downstream 2243687 7380297 ~ 7382360 (-) True G83206
TU94120 other downstream 3741675 5884149 ~ 5884372 (-) True G82727
TU92796 other downstream 3882009 5739526 ~ 5744038 (-) True G81547
TU92232 other downstream 4875486 4748809 ~ 4750561 (-) True G81032
TU96930 other upstream 853611 10479861 ~ 10480700 (-) True G85170
TU96941 other upstream 937209 10572377 ~ 10572440 (-) True G85180
TU96958 other upstream 965954 10592204 ~ 10595337 (-) True G85188
TU97193 other upstream 1408782 11035032 ~ 11035466 (-) True G85401
TU97461 other upstream 1972810 11600778 ~ 11600941 (-) True G85628

Expression Profile