RNA id: TU95755


Basic Information

Item Value
RNA id TU95755
length 223
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G84181
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9920024 ~ 9920246 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATGAATACAGTATAGCAGCATTCGAATGAAGTTTATCAATACATGTTAGAATATACCGTGTATATTTTTATCACATCCAACAGTCTTTTAAATCCATTCACTGATTGTTAATTTTTATTTTTTTATTCACTGTTATGTAGCCGTATTTGCTTTATTTTCCCCTTCATTTCCCGTATCTCTTAACTTTTTTGTAGGCCTATGTTAGCTATATTTTGTAAATAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95754 lncRNA upstream 1690 9918097 ~ 9918334 (+) True G84180
TU95753 lncRNA upstream 2361 9916805 ~ 9917663 (+) True G84179
TU95743 lncRNA upstream 16102 9901108 ~ 9903922 (+) False G84171
TU95745 lncRNA upstream 18120 9901108 ~ 9901904 (+) True G84171
TU95738 lncRNA upstream 30341 9885667 ~ 9889683 (+) True G84167
TU95771 lncRNA downstream 114955 10035201 ~ 10036953 (+) True G84194
TU95796 lncRNA downstream 159187 10079433 ~ 10081200 (+) True G84216
TU95797 lncRNA downstream 162048 10082294 ~ 10084049 (+) True G84217
TU95823 lncRNA downstream 197368 10117614 ~ 10117854 (+) True G84242
TU95781 lncRNA downstream 203514 10123760 ~ 10127752 (+) True G84202
CI01000013_09681047_09683275.mRNA mRNA upstream 236591 9681047 ~ 9683433 (+) True CI01000013_09681047_09683275
CI01000013_09430170_09443518.mRNA mRNA upstream 476001 9430170 ~ 9444023 (+) True CI01000013_09430170_09443518
CI01000013_09279917_09290301.mRNA mRNA upstream 629264 9279917 ~ 9290760 (+) True CI01000013_09279917_09290301
CI01000013_09243644_09260619.mRNA mRNA upstream 659405 9243644 ~ 9260619 (+) True CI01000013_09243644_09260619
CI01000013_09178561_09180465.mRNA mRNA upstream 738867 9177107 ~ 9181157 (+) False CI01000013_09178561_09180465
CI01000013_10261599_10283287.mRNA mRNA downstream 340025 10260271 ~ 10283967 (+) True CI01000013_10261599_10283287
CI01000013_10335904_10336688.mRNA mRNA downstream 415658 10335904 ~ 10336896 (+) True CI01000013_10335904_10336688
CI01000013_10502138_10525511.mRNA mRNA downstream 580444 10500690 ~ 10525674 (+) True CI01000013_10502138_10525511
CI01000013_10586449_10594082.mRNA mRNA downstream 665572 10585818 ~ 10594442 (+) True CI01000013_10586449_10594082
CI01000013_10756927_10790192.mRNA mRNA downstream 836681 10756927 ~ 10790489 (+) False CI01000013_10756927_10790192
TU95556 other upstream 317789 9601611 ~ 9602235 (+) False G84005
TU95558 other upstream 317840 9601611 ~ 9602184 (+) False G84005
TU93966 other upstream 585076 9329329 ~ 9334948 (+) True G82581
TU93521 other upstream 1878681 8028338 ~ 8041343 (+) True G82168
TU93312 other upstream 2581785 7335945 ~ 7338239 (+) True G81994
TU95773 other downstream 110362 10030608 ~ 10036793 (+) False G84194
TU95794 other downstream 156208 10076454 ~ 10079336 (+) True G84215
TU95833 other downstream 294881 10215127 ~ 10215962 (+) True G84250
TU96004 other downstream 852040 10772286 ~ 10784757 (+) False CI01000013_10756927_10790192
TU96453 other downstream 2249743 12169989 ~ 12170818 (+) True G84768

Expression Profile