RNA id: TU97192


Basic Information

Item Value
RNA id TU97192
length 319
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G85400
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11034519 ~ 11034837 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTACGAAGACTTTAGTCCCCTGCGAGGACTTCAGATGATGCAAACTCTGGATCAACATTTGTTAACATGTATTCATTACTTCATTGTTTCTGTCTTAAATTAATACATTGTTTAAATTAATAGATTGTTAGCTAACTGTGTGATTTGTATCTGTACATTTCTGAAATTACATAACTTGGACACAGTCACCTCTGATAACAGATTACTCTAAATTGTAATGTTGAAATGCATCTTCTGTAAAGCTCCTTTGAAACAATATGTATTGTAAAAAGCGCTATACAAATAAATGTGAATTGAATTGAATCGCAAAACAGCATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97191 lncRNA downstream 92 11034151 ~ 11034427 (-) True G85399
TU97190 lncRNA downstream 1928 11032238 ~ 11032591 (-) True G85398
TU97189 lncRNA downstream 4288 11029997 ~ 11030231 (-) True G85397
TU97188 lncRNA downstream 6432 11027792 ~ 11028087 (-) True G85396
TU97187 lncRNA downstream 7395 11026776 ~ 11027124 (-) True G85395
TU97194 lncRNA upstream 2159 11036996 ~ 11037234 (-) True G85402
TU97195 lncRNA upstream 3296 11038133 ~ 11038375 (-) True G85403
TU97196 lncRNA upstream 5227 11040064 ~ 11040316 (-) True G85404
TU97198 lncRNA upstream 7580 11042417 ~ 11042791 (-) True G85406
TU97222 lncRNA upstream 45496 11080333 ~ 11080593 (-) True G85429
CI01000013_10892125_10899628.mRNA mRNA downstream 134891 10891714 ~ 10899628 (-) True CI01000013_10892125_10899628
CI01000013_10843295_10852581.mRNA mRNA downstream 181938 10843160 ~ 10852581 (-) True CI01000013_10843295_10852581
CI01000013_10838711_10841053.mRNA mRNA downstream 192955 10838497 ~ 10841564 (-) True CI01000013_10838711_10841053
CI01000013_10828622_10836409.mRNA mRNA downstream 197373 10828531 ~ 10837146 (-) True CI01000013_10828622_10836409
CI01000013_10799938_10806858.mRNA mRNA downstream 227661 10798598 ~ 10806858 (-) True CI01000013_10799938_10806858
CI01000013_11262983_11266454.mRNA mRNA upstream 227638 11262475 ~ 11266454 (-) True CI01000013_11262983_11266454
CI01000013_11276658_11278225.mRNA mRNA upstream 241797 11276634 ~ 11278730 (-) True CI01000013_11276658_11278225
CI01000013_11280259_11284882.mRNA mRNA upstream 245347 11280184 ~ 11284882 (-) True CI01000013_11280259_11284882
CI01000013_11308893_11311699.mRNA mRNA upstream 272958 11307795 ~ 11311699 (-) True CI01000013_11308893_11311699
CI01000013_11343431_11351259.mRNA mRNA upstream 307736 11342573 ~ 11351811 (-) True CI01000013_11343431_11351259
TU96958 other downstream 439182 10592204 ~ 10595337 (-) True G85188
TU96941 other downstream 462079 10572377 ~ 10572440 (-) True G85180
TU96930 other downstream 553819 10479861 ~ 10480700 (-) True G85170
TU95233 other downstream 1711675 9307036 ~ 9322844 (-) True CI01000013_09309438_09335834
TU94655 other downstream 3652159 7380297 ~ 7382360 (-) True G83206
TU97193 other upstream 195 11035032 ~ 11035466 (-) True G85401
TU97461 other upstream 564223 11600778 ~ 11600941 (-) True G85628

Expression Profile