RNA id: CI01000016_06813604_06813789.mRNA



Basic Information


Item Value
RNA id CI01000016_06813604_06813789.mRNA
length 334
RNA type mRNA
GC content 0.39
exon number 1
gene id CI01000016_06813604_06813789
representative False

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6809807 ~ 6814285 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GAAACCAGATGGAACCAGGCAGGAACGGTGACGCTATCGTCTCTTGTGGAGGTTTTGCTGAAGGCACGTGGGGCTCATTTACCAGGAGGTTCAACAGGGTTGTATTCGGTCTCTCCTGAGGACACCTGCGAGATTCTGCGTGTGGATCCCCACAGTCGGCGGGAAAACTGCCCCGATCGCACCTGAATTAAGACAAATGTTTAAATATTATATATATAATGTTTAATGTATAATGTTTTAAATATTATATATAATGTTTAAATGTTATATATTTTTTTTTTAGTCCTTTAGAAAAGAAGGTGCTGATTTAAGTGAAAAAATCAACACATCTTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU109463 lncRNA upstream 6578 6806721 ~ 6807026 (+) True G96257
TU109174 lncRNA upstream 86108 6727127 ~ 6727496 (+) True G95992
TU109442 lncRNA upstream 121761 6691190 ~ 6691843 (+) True G96236
TU109366 lncRNA upstream 328828 6484577 ~ 6484776 (+) True G96163
TU109156 lncRNA upstream 436624 6376100 ~ 6376980 (+) True G95974
TU109525 lncRNA downstream 109422 6923359 ~ 6924302 (+) True G96299
TU109531 lncRNA downstream 116469 6930406 ~ 6935195 (+) True G96305
TU109540 lncRNA downstream 121751 6935688 ~ 6936001 (+) True G96308
TU109548 lncRNA downstream 146500 6960437 ~ 6960751 (+) True G96314
TU109551 lncRNA downstream 149422 6963359 ~ 6963881 (+) True G96317
CI01000016_06756366_06782229.mRNA mRNA upstream 30985 6756366 ~ 6782619 (+) True CI01000016_06756366_06782229
CI01000016_06684506_06687365.mRNA mRNA upstream 126199 6684506 ~ 6687405 (+) True CI01000016_06684506_06687365
CI01000016_06398455_06420062.mRNA mRNA upstream 393466 6398455 ~ 6420138 (+) True CI01000016_06398455_06420062
CI01000016_06270425_06375483.mRNA mRNA upstream 438121 6270425 ~ 6375483 (+) True CI01000016_06270425_06375483
CI01000016_06174800_06210259.mRNA mRNA upstream 602573 6174800 ~ 6211031 (+) True CI01000016_06174800_06210259
CI01000016_06890651_06904100.mRNA mRNA downstream 76209 6890146 ~ 6904634 (+) True CI01000016_06890651_06904100
CI01000016_06954301_06958598.mRNA mRNA downstream 140364 6954301 ~ 6958603 (+) True CI01000016_06954301_06958598
CI01000016_07178060_07180135.mRNA mRNA downstream 364123 7178060 ~ 7180810 (+) True CI01000016_07178060_07180135
CI01000016_07214392_07233533.mRNA mRNA downstream 400455 7214392 ~ 7234762 (+) False CI01000016_07214392_07233533
CI01000016_07445055_07456795.mRNA mRNA downstream 631118 7445055 ~ 7457431 (+) True CI01000016_07445055_07456795
TU109033 other upstream 1405741 5405869 ~ 5407863 (+) False CI01000016_05405791_05407797
TU109031 other upstream 1405741 5406748 ~ 5406829 (+) True G95870
TU108946 other upstream 1587663 5219880 ~ 5225941 (+) True G95792
TU108629 other upstream 1976949 4834558 ~ 4836655 (+) True G95503
TU108786 other upstream 2539699 4272636 ~ 4273905 (+) True G95648
TU109637 other downstream 346704 7160641 ~ 7161290 (+) True G96389
TU111256 other downstream 970128 7785226 ~ 7785723 (+) True G97766
TU111320 other downstream 1200426 8014363 ~ 8015775 (+) True G97824
TU111822 other downstream 2182161 8996098 ~ 9002717 (+) True G98288
TU112665 other downstream 2981694 9795631 ~ 9795684 (+) True G99016

Expression Profile