RNA id: CI01000016_09183871_09184200.mRNA



Basic Information


Item Value
RNA id CI01000016_09183871_09184200.mRNA
length 1052
RNA type mRNA
GC content 0.41
exon number 1
gene id CI01000016_09183871_09184200
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9183376 ~ 9184427 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATAAAATGCTAGCGCTTGAGGGCGAGCTTATCACGTGACATCGAAAATATTTTGGAGCGCAGACGGAAAAACCCGGAAAAACAAAATATTTATCATCTAAATGAAAGTCTTTCTTGTCAGTTTTGCAAACTATCATAATTTTTGTGATAAAAGGTAAGTATAATGACAATTGTTCAGTATATAGCCTACTGGGTTTTATTATTTTTTATATATAGATATATATAGCCTATTTTGAAAAGCAGTGCTCGATTATTTACGCCTGGTTCAACAGGTGCAGCGGGTTTTTTCCCCAAGCATTTCTTCTGAATAAAACATCTTGTCTTATAAGCTATAGTACCTTAATGTGCTTTACTTTACATTAAGATAGCCTGTATTGATGTAAAATAAAATATATTGGTTATAACCTTGTTCCTACTAGAACAGTAATACGTTTTCCATCTTTTTTTTTTTTTTTCCATTTCTGATATACTCGTCATGTCAGAGGGACGTCATGATGTCTGGTGCTGACCGTGTTGGACTGACCCACTGTAAGTTTGTGCTGGTGTTTGCAGTCCTCATGGATCTTTTCGGTGTGTCCACCCTCTTGATCGGCGTCTTCGTCCCTCTTGAAATCGGCGGTCGTGACTTTGGTGATCTGTTGGTGTATTCTGGAGCTCTGCTGGTGTTGATGTCTATGGGTGCCTGGATCATGTGGTACAGTGGGAACATTGATGGTTTAATATCAGGAAAGGATCTGACACACAAACGCAATGCTGTGGACCGGCTCGCTCGCACCCTCAGTCGCCGCATACGGAGACCTCAACGCAGCCACAGCACATCCTGACCTCTGGGCATGACAGAGAGCACATACACAGGGCTGCTGGGATACCACACACATGAGCCTAAAATCTAATTCGGAAGAGCAGGAAAATAGCGTTTTACAAGTATGAAGGTTGACAGATGTGTTACAATGTGGTGTTTGCAACTACTGCTACCACAAAACAAGTATGAAATTGCAGTTATTTTGTAGAACCTGTACTGTAGTGCACTATGTACAACTCACAAAATGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111939 lncRNA upstream 7416 9175199 ~ 9175960 (+) False G98391
TU111936 lncRNA upstream 7416 9175432 ~ 9175960 (+) False G98391
TU111937 lncRNA upstream 7464 9175432 ~ 9175912 (+) True G98391
TU111929 lncRNA upstream 57445 9125719 ~ 9125931 (+) True G98385
TU111914 lncRNA upstream 85273 9085228 ~ 9098103 (+) True G98375
TU111940 lncRNA downstream 26923 9211350 ~ 9211766 (+) True G98392
TU111814 lncRNA downstream 40022 9224449 ~ 9226908 (+) True G98280
TU111824 lncRNA downstream 141947 9326374 ~ 9375553 (+) True G98290
TU111805 lncRNA downstream 191790 9376217 ~ 9378050 (+) True G98271
TU111962 lncRNA downstream 215528 9399955 ~ 9402046 (+) True G98409
CI01000016_09181426_09182326.mRNA mRNA upstream 1050 9181426 ~ 9182326 (+) True CI01000016_09181426_09182326
CI01000016_09138227_09156795.mRNA mRNA upstream 25904 9137434 ~ 9157472 (+) True CI01000016_09138227_09156795
CI01000016_09026732_09050431.mRNA mRNA upstream 132538 9026732 ~ 9050838 (+) True CI01000016_09026732_09050431
CI01000016_08916022_08916606.mRNA mRNA upstream 266709 8915028 ~ 8916667 (+) True CI01000016_08916022_08916606
CI01000016_08817749_08824067.mRNA mRNA upstream 359298 8817749 ~ 8824078 (+) True CI01000016_08817749_08824067
CI01000016_09228083_09231481.mRNA mRNA downstream 43656 9228083 ~ 9231635 (+) True CI01000016_09228083_09231481
CI01000016_09240403_09243601.mRNA mRNA downstream 55318 9239745 ~ 9243601 (+) True CI01000016_09240403_09243601
CI01000016_09259876_09260073.mRNA mRNA downstream 75214 9259641 ~ 9260201 (+) True CI01000016_09259876_09260073
CI01000016_09266373_09278553.mRNA mRNA downstream 81138 9265565 ~ 9279131 (+) True CI01000016_09266373_09278553
CI01000016_09299769_09306497.mRNA mRNA downstream 115342 9299769 ~ 9307385 (+) True CI01000016_09299769_09306497
TU111822 other upstream 180659 8996098 ~ 9002717 (+) True G98288
TU111320 other upstream 1167601 8014363 ~ 8015775 (+) True G97824
TU111256 other upstream 1397653 7785226 ~ 7785723 (+) True G97766
TU109637 other upstream 2022086 7160641 ~ 7161290 (+) True G96389
TU109031 other upstream 3775513 5406748 ~ 5406829 (+) True G95870
TU112665 other downstream 611204 9795631 ~ 9795684 (+) True G99016
TU112690 other downstream 739991 9924418 ~ 9925654 (+) True G99041
TU113122 other downstream 1049973 10234400 ~ 10236851 (+) True G99410
TU113168 other downstream 1109964 10294391 ~ 10298904 (+) True G99456
TU113731 other downstream 2487218 11671645 ~ 11672873 (+) True G99940

Expression Profile