RNA id: CI01000016_09663511_09664293.mRNA



Basic Information


Item Value
RNA id CI01000016_09663511_09664293.mRNA
length 652
RNA type mRNA
GC content 0.39
exon number 3
gene id CI01000016_09663511_09664293
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9663511 ~ 9664495 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGACTGTGTCCAGCTCAAGGGGTTGCATTCACTTTTATGAGTTTTTCTACTTTTAAAACTCACTTAAACATGAGAGGAAATATTTTAATTGCCTCTGTGATTTTGATGTCTTTGTTTTGTTTGGGACAAACACTTGAGTGCTTTCGGTGTGATCTTGGATTCTGGAATCTGTGTTACACCACTAAGACAAATTGCAGTGATGATGAGTTGTGTTATGTGGGAATTGGTAAAGCAGCTTCTGTCCTGGATATAAAGGTGATGGGTTGTCTTCCCATGGAGTCATGCAACAAGACCACAGTTGTAGAGTTTCTTGCCAATAAGACCTTATACACCATGAAGACCACGTGTTGTGAGGAAGACTTCTGCAACTCCTGCCCTGCAGTTCAGTTGTCCCTCACTCCTCTCTTGTTTACCATACTTCTCATTGCCCAGATGATGGGTGCTTTCTGATGATTTTTTTTTTCTTTTGGACTTCCAAGTTCTAATTGTCATAAGGGATTGAAGGTTTTTCTTTCATGTTTACATTCTTCATGTACTGTAACCGTTTACTTGACTGTTTTGAATGATCTAAAACGGCTGCCTTCATGTCAGAGCACGGTTGGATACATTTTTCTAGTTGTTTTTGTTCATCCAAAAAGAGTAAAGATTACTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU112592 lncRNA upstream 65797 9597475 ~ 9597714 (+) True G98953
TU112589 lncRNA upstream 76198 9587112 ~ 9587313 (+) True G98950
TU112588 lncRNA upstream 76943 9586229 ~ 9586568 (+) True G98949
TU112574 lncRNA upstream 95300 9567985 ~ 9568211 (+) True G98935
TU112571 lncRNA upstream 100052 9563160 ~ 9563459 (+) True G98932
TU112661 lncRNA downstream 83488 9747983 ~ 9748261 (+) True G99013
TU112671 lncRNA downstream 101483 9765978 ~ 9769724 (+) True G99022
TU112672 lncRNA downstream 105370 9769865 ~ 9773224 (+) True G99023
TU112673 lncRNA downstream 121115 9785610 ~ 9786563 (+) True G99024
TU112683 lncRNA downstream 192017 9856512 ~ 9856848 (+) True G99034
CI01000016_09615039_09616082.mRNA mRNA upstream 46092 9612791 ~ 9617419 (+) True CI01000016_09615039_09616082
CI01000016_09524279_09527107.mRNA mRNA upstream 136304 9523617 ~ 9527207 (+) True CI01000016_09524279_09527107
CI01000016_09364728_09366356.mRNA mRNA upstream 297155 9364649 ~ 9366356 (+) True CI01000016_09364728_09366356
CI01000016_09363759_09363932.mRNA mRNA upstream 299138 9363759 ~ 9364373 (+) True CI01000016_09363759_09363932
CI01000016_09357617_09361063.mRNA mRNA upstream 302448 9357617 ~ 9361063 (+) True CI01000016_09357617_09361063
CI01000016_09664848_09674309.mRNA mRNA downstream 353 9664848 ~ 9674728 (+) True CI01000016_09664848_09674309
CI01000016_09686132_09706397.mRNA mRNA downstream 21637 9686132 ~ 9706453 (+) True CI01000016_09686132_09706397
CI01000016_09731997_09734823.mRNA mRNA downstream 67502 9731997 ~ 9734823 (+) True CI01000016_09731997_09734823
CI01000016_09748780_09759954.mRNA mRNA downstream 84285 9748780 ~ 9760383 (+) True CI01000016_09748780_09759954
CI01000016_09788926_09791625.mRNA mRNA downstream 124431 9788926 ~ 9791923 (+) True CI01000016_09788926_09791625
TU111822 other upstream 660794 8996098 ~ 9002717 (+) True G98288
TU111320 other upstream 1647736 8014363 ~ 8015775 (+) True G97824
TU111256 other upstream 1877788 7785226 ~ 7785723 (+) True G97766
TU109637 other upstream 2502221 7160641 ~ 7161290 (+) True G96389
TU109031 other upstream 4255648 5406748 ~ 5406829 (+) True G95870
TU112665 other downstream 131136 9795631 ~ 9795684 (+) True G99016
TU112690 other downstream 259923 9924418 ~ 9925654 (+) True G99041
TU113122 other downstream 569905 10234400 ~ 10236851 (+) True G99410
TU113168 other downstream 629896 10294391 ~ 10298904 (+) True G99456
TU113731 other downstream 2007150 11671645 ~ 11672873 (+) True G99940

Expression Profile