RNA id: TU106764


Basic Information

Item Value
RNA id TU106764
length 450
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G93829
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 188604 ~ 189338 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CATTTCTGCAGGCTGCATCTTACTCTGTGAGATAAACAGTCACTCTTTTCATAGCTTTTGCTGGCTCTGAGACACTCGCTTGGTATTTGTCCTGCTTTTTGTCTAGCAAAAAAATCCCTCATCACTAAATGAAAGCTTAAAATGAAGGCCTGATTATTTCAGGGGCCTTGTCACAAGTCCATTGTTTTTGAATTTCTGTGTTACTTTTGCTATATTTTCAAACTTAAAACAATGATTTGGTAATCCTCTTGTACTGTCCTCTTTTGTGCTAAGAAATAAGTCTCCTGACAGTTCTCTCCCAAGTGGTTCCATTGTTGTCATCATTAAGTCTGAGAATGATTCAGTGGGCTATATAACACTTTTAATTGTCAAGAAATTACTTCTCTTTAAATGTTTTGGTTCAACATACTTACCTGTTGATCAAACATTGCCTTAAACTTACACCAGAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106730 lncRNA downstream 37639 62817 ~ 150965 (-) True G93801
TU106731 lncRNA downstream 49730 132552 ~ 138874 (-) True G93802
TU106734 lncRNA downstream 129009 59358 ~ 59595 (-) True G93805
TU106770 lncRNA upstream 9820 199158 ~ 202946 (-) True G93835
TU106815 lncRNA upstream 91656 280994 ~ 281211 (-) True G93873
TU106892 lncRNA upstream 211155 400493 ~ 401772 (-) True G93934
TU106917 lncRNA upstream 319733 509071 ~ 509303 (-) True G93954
TU106952 lncRNA upstream 384962 574300 ~ 576181 (-) True G93988
CI01000016_00166492_00172759.mRNA mRNA downstream 15845 166085 ~ 172759 (-) True CI01000016_00166492_00172759
CI01000016_00153934_00154312.mRNA mRNA downstream 32982 153908 ~ 155622 (-) True CI01000016_00153934_00154312
CI01000016_00099623_00100245.mRNA mRNA downstream 88359 98834 ~ 100245 (-) True CI01000016_00099623_00100245
CI01000016_00079894_00094596.mRNA mRNA downstream 94008 78944 ~ 94596 (-) True CI01000016_00079894_00094596
CI01000016_00068703_00072323.mRNA mRNA downstream 115523 68658 ~ 73081 (-) True CI01000016_00068703_00072323
CI01000016_00251025_00251471.mRNA mRNA upstream 60880 250218 ~ 251486 (-) True CI01000016_00251025_00251471
CI01000016_00448107_00452861.mRNA mRNA upstream 258520 447858 ~ 452861 (-) True CI01000016_00448107_00452861
CI01000016_00456765_00460615.mRNA mRNA upstream 265490 454828 ~ 461209 (-) True CI01000016_00456765_00460615
CI01000016_00471859_00490955.mRNA mRNA upstream 281445 470783 ~ 490955 (-) True CI01000016_00471859_00490955
CI01000016_00513504_00514565.mRNA mRNA upstream 322786 512124 ~ 514744 (-) True CI01000016_00513504_00514565
TU107853 other upstream 2081498 2270836 ~ 2276275 (-) True G94786
TU108180 other upstream 2795922 2985260 ~ 2985641 (-) True G95070
TU109910 other upstream 3446269 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 3676423 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 4723370 4912708 ~ 4923404 (-) True G97040

Expression Profile