RNA id: TU106237



Basic Information


Item Value
RNA id TU106237
length 397
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G93367
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 778775 ~ 779171 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAACACTGTTGTTGAGTTTTTCTTTTGCTATTTGAGAAAATGGGGACACAAAAATATATTATTTAATGTAATCTCTCATTCACCGCCATAGAATTTTACCCAACTATGATGACTTCCGCTTCGAGAAACCCGGACATGTGAAAAGGGTCAATGGTGCATGAGGAGAAAATACATCATGATTGGACAATTTGAAATATTTATAAATAGACCTATAGCAATATTTGTTTAAAAAAATAATAATAATAATTTTCTTCAAATTTTCTTGAGTCCCTCATTACCTGATGTGGATGTCAAAATCAAACCCTGCAGTAAATACAAAAGAAACATTGAATATATTATAGATTTAATATAATGTTCCCGTTGCTTCATCTAATGCTAGACTTTAAATCAAATTTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106234 lncRNA upstream 4531 773794 ~ 774244 (+) True G93364
TU106229 lncRNA upstream 5507 759186 ~ 773268 (+) True G93359
TU106228 lncRNA upstream 24936 753601 ~ 753839 (+) True G93358
TU106227 lncRNA upstream 26018 752523 ~ 752757 (+) True G93357
TU106225 lncRNA upstream 29217 749343 ~ 749558 (+) True G93355
TU106301 lncRNA downstream 60995 840166 ~ 840495 (+) True G93423
TU106285 lncRNA downstream 82933 862104 ~ 868937 (+) True G93410
TU106284 lncRNA downstream 148669 927840 ~ 932801 (+) True G93409
TU106289 lncRNA downstream 183408 962579 ~ 1040425 (+) True G93414
TU106288 lncRNA downstream 299657 1078828 ~ 1079935 (+) True G93413
CI01000016_00772375_00772848.mRNA mRNA upstream 5886 772270 ~ 772889 (+) True CI01000016_00772375_00772848
CI01000016_00569502_00581271.mRNA mRNA upstream 197276 569502 ~ 581499 (+) True CI01000016_00569502_00581271
CI01000016_00540871_00541608.mRNA mRNA upstream 237052 540632 ~ 541723 (+) True CI01000016_00540871_00541608
CI01000016_00496095_00506965.mRNA mRNA upstream 271742 496095 ~ 507033 (+) True CI01000016_00496095_00506965
CI01000016_00318676_00446341.mRNA mRNA upstream 332434 318676 ~ 446341 (+) True CI01000016_00318676_00446341
CI01000016_00885996_00887374.mRNA mRNA downstream 106825 885996 ~ 887478 (+) True CI01000016_00885996_00887374
CI01000016_00952494_00954683.mRNA mRNA downstream 173323 952494 ~ 954953 (+) True CI01000016_00952494_00954683
CI01000016_00959079_00960728.mRNA mRNA downstream 179482 958653 ~ 961060 (+) True CI01000016_00959079_00960728
CI01000016_00972599_01002933.mRNA mRNA downstream 192941 972112 ~ 1003172 (+) True CI01000016_00972599_01002933
CI01000016_01033465_01037665.mRNA mRNA downstream 254294 1033465 ~ 1038446 (+) True CI01000016_01033465_01037665
TU106281 other downstream 126229 905400 ~ 927532 (+) True G93406
TU108565 other downstream 3083004 3862175 ~ 3862305 (+) True G95439
TU108786 other downstream 3493465 4272636 ~ 4273905 (+) True G95648
TU108629 other downstream 4055387 4834558 ~ 4836655 (+) True G95503
TU108946 other downstream 4440709 5219880 ~ 5225941 (+) True G95792

Expression Profile