RNA id: TU108257



Basic Information


Item Value
RNA id TU108257
length 221
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G95145
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2767055 ~ 2767275 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CGTTGCCTACACTCAGGAAAAAAATGGTACAAAAGCTGTATGGGACGGCGCCCTTTAAAAAGGTTCTAATATGTAGTATTTAGGTATGTACACTTTTGGTACAAATATGTACCTTTGAATTACTAATTACGCACTCTTGAGCGTGTAGAAGCTTACCTCACTCCTGTTACTTGTTTTTTTCCAATTTTCTAGATGCGCAAACACACACACACACATACACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108255 lncRNA downstream 3716 2763135 ~ 2763339 (-) True G95143
TU108254 lncRNA downstream 4190 2762648 ~ 2762865 (-) True G95142
TU108252 lncRNA downstream 7721 2759119 ~ 2759334 (-) True G95140
TU108251 lncRNA downstream 8315 2758527 ~ 2758740 (-) True G95139
TU108250 lncRNA downstream 9870 2756871 ~ 2757185 (-) True G95138
TU108258 lncRNA upstream 1663 2768938 ~ 2769208 (-) True G95146
TU108259 lncRNA upstream 2781 2770056 ~ 2770478 (-) True G95147
TU108260 lncRNA upstream 4128 2771403 ~ 2771631 (-) True G95148
TU108261 lncRNA upstream 4760 2772035 ~ 2772492 (-) True G95149
TU108262 lncRNA upstream 5227 2772502 ~ 2772717 (-) True G95150
CI01000016_02679833_02695963.mRNA mRNA downstream 71092 2678538 ~ 2695963 (-) True CI01000016_02679833_02695963
CI01000016_02589744_02622875.mRNA mRNA downstream 144180 2589475 ~ 2622875 (-) True CI01000016_02589744_02622875
CI01000016_02568824_02575674.mRNA mRNA downstream 191381 2568610 ~ 2575674 (-) True CI01000016_02568824_02575674
CI01000016_02467451_02477544.mRNA mRNA downstream 289511 2467451 ~ 2477544 (-) True CI01000016_02467451_02477544
CI01000016_02328065_02334778.mRNA mRNA downstream 431319 2327812 ~ 2335736 (-) True CI01000016_02328065_02334778
CI01000016_02802780_02815803.mRNA mRNA upstream 35324 2802599 ~ 2815803 (-) True CI01000016_02802780_02815803
CI01000016_02817855_02829699.mRNA mRNA upstream 50580 2817855 ~ 2830457 (-) True CI01000016_02817855_02829699
CI01000016_02884294_02912568.mRNA mRNA upstream 115571 2882846 ~ 2912568 (-) True CI01000016_02884294_02912568
CI01000016_02936606_02957342.mRNA mRNA upstream 168834 2936109 ~ 2957875 (-) True CI01000016_02936606_02957342
CI01000016_02991852_02994428.mRNA mRNA upstream 223945 2991220 ~ 2994428 (-) True CI01000016_02991852_02994428
TU107853 other downstream 490780 2270836 ~ 2276275 (-) True G94786
TU108180 other upstream 217985 2985260 ~ 2985641 (-) True G95070
TU109910 other upstream 868332 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 1098486 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 2145433 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 2558244 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265

Expression Profile