RNA id: TU108273



Basic Information


Item Value
RNA id TU108273
length 225
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G95161
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2848679 ~ 2848903 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AACAAAACAAGTAGAAATTAAAGCTGCAAGCAGCGATGAAAGGGCCCTCACACCCAGATCCACCACCACCCGTTGGCTTTAGGAAAACAGTGAATAGTGGGTGACATGCATGTAAGCGAGTAAATACAGGAGAAATATGGCAAAGTCATTTCGACGTGCCACACTTTCTGCTGCCAACAGGTGGCGCTTTGACTATTATTGAATATTGCCATTTAGATGTCTTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108270 lncRNA downstream 8985 2839470 ~ 2839694 (-) True G95158
TU108269 lncRNA downstream 10159 2838255 ~ 2838520 (-) True G95157
TU108266 lncRNA downstream 72813 2775445 ~ 2775866 (-) True G95154
TU108265 lncRNA downstream 73650 2774594 ~ 2775029 (-) True G95153
TU108264 lncRNA downstream 74961 2773510 ~ 2773718 (-) True G95152
TU108278 lncRNA upstream 15866 2864769 ~ 2865131 (-) True G95166
TU108284 lncRNA upstream 28628 2877531 ~ 2877739 (-) True G95172
TU108293 lncRNA upstream 169891 3018794 ~ 3019070 (-) True G95181
TU108316 lncRNA upstream 194764 3043667 ~ 3043866 (-) True G95199
TU108308 lncRNA upstream 200988 3049891 ~ 3050726 (-) True G95191
CI01000016_02817855_02829699.mRNA mRNA downstream 18222 2817855 ~ 2830457 (-) True CI01000016_02817855_02829699
CI01000016_02802780_02815803.mRNA mRNA downstream 32876 2802599 ~ 2815803 (-) True CI01000016_02802780_02815803
CI01000016_02679833_02695963.mRNA mRNA downstream 152716 2678538 ~ 2695963 (-) True CI01000016_02679833_02695963
CI01000016_02589744_02622875.mRNA mRNA downstream 225804 2589475 ~ 2622875 (-) True CI01000016_02589744_02622875
CI01000016_02568824_02575674.mRNA mRNA downstream 273005 2568610 ~ 2575674 (-) True CI01000016_02568824_02575674
CI01000016_02884294_02912568.mRNA mRNA upstream 33943 2882846 ~ 2912568 (-) True CI01000016_02884294_02912568
CI01000016_02936606_02957342.mRNA mRNA upstream 87206 2936109 ~ 2957875 (-) True CI01000016_02936606_02957342
CI01000016_02991852_02994428.mRNA mRNA upstream 142317 2991220 ~ 2994428 (-) True CI01000016_02991852_02994428
CI01000016_03060171_03060612.mRNA mRNA upstream 210640 3059543 ~ 3060612 (-) True CI01000016_03060171_03060612
CI01000016_03062846_03063013.mRNA mRNA upstream 213943 3062846 ~ 3063272 (-) True CI01000016_03062846_03063013
TU107853 other downstream 572404 2270836 ~ 2276275 (-) True G94786
TU108180 other upstream 136357 2985260 ~ 2985641 (-) True G95070
TU109910 other upstream 786704 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 1016858 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 2063805 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 2476616 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265

Expression Profile