RNA id: TU108327



Basic Information


Item Value
RNA id TU108327
length 231
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G95210
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3105760 ~ 3106448 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTAACAGAGTAAGTCTTATACGCAGTTGATGCAGTGCAGCGCCACAATTGTTAACAGAGTAAGTCGAATCGGACAGGACTCAGGGATTCAAACAGGTAAGGGGGAAAAAGGGTGTGAACATTTGGTCAAAATCTCATGTTATAAAAGATGAAGTGCTATGCAGGGTATTTAAGAAAATATTAGCTGATTAGACAGCAATACTGAGCTAAACTGCAAACTGTCTGCCCTCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108320 lncRNA downstream 14009 3091365 ~ 3091751 (-) True G95203
TU108308 lncRNA downstream 55034 3049891 ~ 3050726 (-) True G95191
TU108316 lncRNA downstream 61894 3043667 ~ 3043866 (-) True G95199
TU108293 lncRNA downstream 86690 3018794 ~ 3019070 (-) True G95181
TU108284 lncRNA downstream 228021 2877531 ~ 2877739 (-) True G95172
TU108429 lncRNA upstream 215632 3322080 ~ 3322366 (-) True CI01000016_03322103_03326683
TU108430 lncRNA upstream 217919 3324367 ~ 3324682 (-) True G95313
TU108432 lncRNA upstream 219464 3325912 ~ 3326175 (-) True G95315
TU108502 lncRNA upstream 291734 3398182 ~ 3400957 (-) False G95376
TU108500 lncRNA upstream 293082 3399530 ~ 3404860 (-) True G95376
CI01000016_03082653_03084658.mRNA mRNA downstream 21102 3082386 ~ 3084658 (-) True CI01000016_03082653_03084658
CI01000016_03072793_03080040.mRNA mRNA downstream 25720 3072728 ~ 3080040 (-) True CI01000016_03072793_03080040
CI01000016_03064633_03068201.mRNA mRNA downstream 36668 3064562 ~ 3069092 (-) True CI01000016_03064633_03068201
CI01000016_03062846_03063013.mRNA mRNA downstream 42488 3062846 ~ 3063272 (-) True CI01000016_03062846_03063013
CI01000016_03060171_03060612.mRNA mRNA downstream 45148 3059543 ~ 3060612 (-) True CI01000016_03060171_03060612
CI01000016_03322103_03326683.mRNA mRNA upstream 215555 3322003 ~ 3330762 (-) False CI01000016_03322103_03326683
CI01000016_03555967_03558776.mRNA mRNA upstream 448852 3555300 ~ 3559186 (-) True CI01000016_03555967_03558776
CI01000016_03647744_03675574.mRNA mRNA upstream 541205 3647653 ~ 3675585 (-) False CI01000016_03647744_03675574
CI01000016_03719404_03722988.mRNA mRNA upstream 612719 3719167 ~ 3723058 (-) True CI01000016_03719404_03722988
CI01000016_03834829_03843163.mRNA mRNA upstream 728052 3834500 ~ 3843266 (-) True CI01000016_03834829_03843163
TU108180 other downstream 120119 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 829485 2270836 ~ 2276275 (-) True G94786
TU109910 other upstream 529159 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 759313 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 1806260 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 2219071 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 2305811 5415682 ~ 5418217 (-) True G97020

Expression Profile