RNA id: TU109926


Basic Information

Item Value
RNA id TU109926
length 211
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G96644
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3581219 ~ 3581429 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTGGCTGTCAGTCAGAATTTTACCCTCAAAGGAATTTCAAGAACTAGCTTAAATCCTTGGCTCAATTAAGTTTACAAGTTACTTGCAAATACCTGACCTGAAAATTCTGAACCCACATTTTTAAGTCTGAAACAGTCTGATATTCTTTTTAACACAACAAACAGCAAATCATTTAGGGTTTTAATTCAGGGTTTTCAACCGGGTTTCCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU109919 lncRNA downstream 17481 3562854 ~ 3563738 (-) True G96637
TU109882 lncRNA downstream 26576 3549415 ~ 3554643 (-) False G96605
TU109881 lncRNA downstream 26576 3551387 ~ 3554643 (-) True G96605
TU109887 lncRNA downstream 35884 3545119 ~ 3545335 (-) True G96610
TU109886 lncRNA downstream 37064 3543873 ~ 3544155 (-) True G96609
TU109949 lncRNA upstream 26907 3608336 ~ 3608877 (-) False G96655
TU109948 lncRNA upstream 27141 3608570 ~ 3608877 (-) True G96655
TU109893 lncRNA upstream 42408 3623837 ~ 3626004 (-) True G96614
TU109952 lncRNA upstream 52830 3634259 ~ 3634460 (-) True G96658
TU109908 lncRNA upstream 153096 3734525 ~ 3800968 (-) True G96626
CI01000016_03555967_03558776.mRNA mRNA downstream 22033 3555300 ~ 3559186 (-) True CI01000016_03555967_03558776
CI01000016_03322103_03326683.mRNA mRNA downstream 250457 3322003 ~ 3330762 (-) False CI01000016_03322103_03326683
CI01000016_03082653_03084658.mRNA mRNA downstream 496561 3082386 ~ 3084658 (-) True CI01000016_03082653_03084658
CI01000016_03072793_03080040.mRNA mRNA downstream 501179 3072728 ~ 3080040 (-) True CI01000016_03072793_03080040
CI01000016_03064633_03068201.mRNA mRNA downstream 512127 3064562 ~ 3069092 (-) True CI01000016_03064633_03068201
CI01000016_03647744_03675574.mRNA mRNA upstream 66224 3647653 ~ 3675585 (-) False CI01000016_03647744_03675574
CI01000016_03719404_03722988.mRNA mRNA upstream 137738 3719167 ~ 3723058 (-) True CI01000016_03719404_03722988
CI01000016_03834829_03843163.mRNA mRNA upstream 253071 3834500 ~ 3843266 (-) True CI01000016_03834829_03843163
CI01000016_03881771_03883341.mRNA mRNA upstream 299064 3880493 ~ 3883466 (-) True CI01000016_03881771_03883341
CI01000016_03921124_03930996.mRNA mRNA upstream 338626 3920055 ~ 3931162 (-) False CI01000016_03921124_03930996
TU108180 other downstream 595578 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 1304944 2270836 ~ 2276275 (-) True G94786
TU109910 other upstream 54178 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 284332 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 1331279 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 1744090 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 1830830 5415682 ~ 5418217 (-) True G97020

Expression Profile