RNA id: TU110472



Basic Information


Item Value
RNA id TU110472
length 222
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G97092
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4957517 ~ 4957738 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTAATACCGCCTCTCATCTGGACACTTTACAATCCCATGAGACCACAGGAGAAGATTTGTGAATGGTAGTGAAATGGCAAAAGAAATGGCAAAACTCACGCTGTCCAATCAGATGACAATGACAGCCTGACGAATGTAATATGTCCGGATTACATTCAAACCACACACATTCATAATATACAACATACTTTTTAAACAGTCACAAAATAATTACTTTAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110471 lncRNA downstream 73 4957201 ~ 4957444 (-) True G97091
TU110426 lncRNA downstream 59797 4816630 ~ 4897720 (-) True G97050
TU110454 lncRNA downstream 79735 4877344 ~ 4877782 (-) True G97074
TU110447 lncRNA downstream 104455 4852100 ~ 4853062 (-) True G97069
TU110356 lncRNA downstream 270403 4686861 ~ 4687114 (-) True G96983
TU110476 lncRNA upstream 2160 4959898 ~ 4960153 (-) True G97096
TU110477 lncRNA upstream 4848 4962586 ~ 4963644 (-) True G97097
TU110478 lncRNA upstream 6670 4964408 ~ 4964631 (-) True G97098
TU110480 lncRNA upstream 8356 4966094 ~ 4966306 (-) True G97100
TU110481 lncRNA upstream 9264 4967002 ~ 4967302 (-) True G97101
CI01000016_04936283_04939240.mRNA mRNA downstream 18277 4936013 ~ 4939240 (-) True CI01000016_04936283_04939240
CI01000016_04927541_04930989.mRNA mRNA downstream 26528 4926094 ~ 4930989 (-) True CI01000016_04927541_04930989
CI01000016_04921091_04922518.mRNA mRNA downstream 34999 4920868 ~ 4922518 (-) False CI01000016_04921091_04922518
CI01000016_04802496_04812976.mRNA mRNA downstream 144251 4802454 ~ 4813266 (-) True CI01000016_04802496_04812976
CI01000016_04696937_04698098.mRNA mRNA downstream 258899 4696685 ~ 4698618 (-) True CI01000016_04696937_04698098
CI01000016_04971399_04981029.mRNA mRNA upstream 13604 4971342 ~ 4981400 (-) True CI01000016_04971399_04981029
CI01000016_04995532_04996727.mRNA mRNA upstream 37074 4994812 ~ 4996727 (-) True CI01000016_04995532_04996727
CI01000016_05011639_05013290.mRNA mRNA upstream 52035 5009773 ~ 5013290 (-) True CI01000016_05011639_05013290
CI01000016_05037135_05040030.mRNA mRNA upstream 79397 5037135 ~ 5041364 (-) True CI01000016_05037135_05040030
CI01000016_05052905_05056425.mRNA mRNA upstream 94637 5052375 ~ 5056425 (-) True CI01000016_05052905_05056425
TU110416 other downstream 34113 4912708 ~ 4923404 (-) True G97040
TU110003 other downstream 1026466 3865761 ~ 3890326 (-) True G96690
TU109910 other downstream 1292204 3635607 ~ 3665313 (-) True G96628
TU108180 other downstream 1971876 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 2681242 2270836 ~ 2276275 (-) True G94786
TU110385 other upstream 367781 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 454521 5415682 ~ 5418217 (-) True G97020
TU110786 other upstream 1201248 6158986 ~ 6159721 (-) True G97341
TU112287 other upstream 3931095 8888833 ~ 8894737 (-) True CI01000016_08893013_08893496
TU112294 other upstream 3979051 8936789 ~ 8936818 (-) True G98677

Expression Profile