RNA id: TU110476



Basic Information


Item Value
RNA id TU110476
length 256
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G97096
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4959898 ~ 4960153 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTACCGTTGGACTGTTTATTCTCTGTGATTCTCTGCTGCCTGCCCTGATCTTTGCCTGTATACTGGACTGTGTTTGCTTGCCGCCTGCCCTGATCTCCGCCTGTGACCCGATACTGTTTGTCTGCCGCCTGCTTCGACCATTGCCTGTCCCTGTTCGTGTCTTTGCCTTAGCCCCTGTGATTGTTCTAATAAAAGCTGCAAATGGATCCCCATTCTGCCGACCCGTCGTTACACAGATGTAATAAAGTAATAGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110472 lncRNA downstream 2160 4957517 ~ 4957738 (-) True G97092
TU110471 lncRNA downstream 2454 4957201 ~ 4957444 (-) True G97091
TU110426 lncRNA downstream 62178 4816630 ~ 4897720 (-) True G97050
TU110454 lncRNA downstream 82116 4877344 ~ 4877782 (-) True G97074
TU110447 lncRNA downstream 106836 4852100 ~ 4853062 (-) True G97069
TU110477 lncRNA upstream 2433 4962586 ~ 4963644 (-) True G97097
TU110478 lncRNA upstream 4255 4964408 ~ 4964631 (-) True G97098
TU110480 lncRNA upstream 5941 4966094 ~ 4966306 (-) True G97100
TU110481 lncRNA upstream 6849 4967002 ~ 4967302 (-) True G97101
TU110413 lncRNA upstream 9236 4969389 ~ 4970780 (-) True G97037
CI01000016_04936283_04939240.mRNA mRNA downstream 20658 4936013 ~ 4939240 (-) True CI01000016_04936283_04939240
CI01000016_04927541_04930989.mRNA mRNA downstream 28909 4926094 ~ 4930989 (-) True CI01000016_04927541_04930989
CI01000016_04921091_04922518.mRNA mRNA downstream 37380 4920868 ~ 4922518 (-) False CI01000016_04921091_04922518
CI01000016_04802496_04812976.mRNA mRNA downstream 146632 4802454 ~ 4813266 (-) True CI01000016_04802496_04812976
CI01000016_04696937_04698098.mRNA mRNA downstream 261280 4696685 ~ 4698618 (-) True CI01000016_04696937_04698098
CI01000016_04971399_04981029.mRNA mRNA upstream 11189 4971342 ~ 4981400 (-) True CI01000016_04971399_04981029
CI01000016_04995532_04996727.mRNA mRNA upstream 34659 4994812 ~ 4996727 (-) True CI01000016_04995532_04996727
CI01000016_05011639_05013290.mRNA mRNA upstream 49620 5009773 ~ 5013290 (-) True CI01000016_05011639_05013290
CI01000016_05037135_05040030.mRNA mRNA upstream 76982 5037135 ~ 5041364 (-) True CI01000016_05037135_05040030
CI01000016_05052905_05056425.mRNA mRNA upstream 92222 5052375 ~ 5056425 (-) True CI01000016_05052905_05056425
TU110416 other downstream 36494 4912708 ~ 4923404 (-) True G97040
TU110003 other downstream 1028847 3865761 ~ 3890326 (-) True G96690
TU109910 other downstream 1294585 3635607 ~ 3665313 (-) True G96628
TU108180 other downstream 1974257 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 2683623 2270836 ~ 2276275 (-) True G94786
TU110385 other upstream 365366 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 452106 5415682 ~ 5418217 (-) True G97020
TU110786 other upstream 1198833 6158986 ~ 6159721 (-) True G97341
TU112287 other upstream 3928680 8888833 ~ 8894737 (-) True CI01000016_08893013_08893496
TU112294 other upstream 3976636 8936789 ~ 8936818 (-) True G98677

Expression Profile