RNA id: TU110692


Basic Information

Item Value
RNA id TU110692
length 342
lncRNA type inter_gene
GC content 0.25
exon number 1
gene id G97255
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5834570 ~ 5834911 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGAGTAATTAATGGCAGAATTTTCATTTTTGGGTGAACTAACCCTTTAACTAATGTTATCAAACCAAACCTTATTGTTAAGTGTTACCTATTTATATGAAATAATATTTAAGCATTAAATATTAAGCTGTCTAACCAAATAAAAAACAGCATGGTGTCCATTTATGTCCAGTATTGAATCAATTAATTGAAATAAATTACAGCTGTTACCTAAATTAAGTCATTATCAAATAAAAAAAGCAAAAGATATTGTATAATTGTGGCGCTATAACACATTCTAATATTTATCCAGCAGTGTTGTTATTGTAAACTAAAACTATTAAAAAAATATTAAAATTTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110689 lncRNA downstream 56902 5777404 ~ 5777668 (-) True G97252
TU110652 lncRNA downstream 261001 5566293 ~ 5573569 (-) True G97215
TU110640 lncRNA downstream 268417 5565197 ~ 5566153 (-) True G97203
TU110571 lncRNA downstream 280584 5553295 ~ 5553986 (-) True G97180
TU110556 lncRNA downstream 422650 5411655 ~ 5411920 (-) True G97165
TU110595 lncRNA upstream 46466 5881377 ~ 5886137 (-) False G97185
TU110589 lncRNA upstream 47767 5882678 ~ 5887097 (-) False G97185
TU110592 lncRNA upstream 48031 5882942 ~ 5886137 (-) True G97185
TU110601 lncRNA upstream 52770 5887681 ~ 5923379 (-) False G97188
TU110602 lncRNA upstream 52770 5887681 ~ 5893310 (-) False G97188
CI01000016_05824628_05826424.mRNA mRNA downstream 8146 5823123 ~ 5826424 (-) True CI01000016_05824628_05826424
CI01000016_05804456_05811231.mRNA mRNA downstream 23339 5803128 ~ 5811231 (-) True CI01000016_05804456_05811231
CI01000016_05793987_05797545.mRNA mRNA downstream 37025 5793973 ~ 5797545 (-) True CI01000016_05793987_05797545
CI01000016_05781693_05789936.mRNA mRNA downstream 44207 5781189 ~ 5790363 (-) True CI01000016_05781693_05789936
CI01000016_05765402_05775268.mRNA mRNA downstream 59273 5764776 ~ 5775297 (-) True CI01000016_05765402_05775268
CI01000016_05843077_05863364.mRNA mRNA upstream 7209 5842120 ~ 5863364 (-) True CI01000016_05843077_05863364
CI01000016_05871353_05874812.mRNA mRNA upstream 36273 5871184 ~ 5874812 (-) True CI01000016_05871353_05874812
CI01000016_05910340_05911197.mRNA mRNA upstream 75341 5910252 ~ 5912172 (-) True CI01000016_05910340_05911197
CI01000016_05930860_05934507.mRNA mRNA upstream 95942 5930853 ~ 5934507 (-) True CI01000016_05930860_05934507
CI01000016_05945614_05946695.mRNA mRNA upstream 110648 5945559 ~ 5948309 (-) True CI01000016_05945614_05946695
TU110396 other downstream 416353 5415682 ~ 5418217 (-) True G97020
TU110385 other downstream 503724 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110416 other downstream 911166 4912708 ~ 4923404 (-) True G97040
TU110003 other downstream 1903519 3865761 ~ 3890326 (-) True G96690
TU109910 other downstream 2169257 3635607 ~ 3665313 (-) True G96628
TU110786 other upstream 324075 6158986 ~ 6159721 (-) True G97341
TU112287 other upstream 3053922 8888833 ~ 8894737 (-) True CI01000016_08893013_08893496
TU112294 other upstream 3101878 8936789 ~ 8936818 (-) True G98677
TU112296 other upstream 3400085 9234996 ~ 9239929 (-) True G98679
TU112308 other upstream 3421191 9256102 ~ 9257611 (-) True G98691

Expression Profile