RNA id: TU114363



Basic Information


Item Value
RNA id TU114363
length 230
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G100512
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10974646 ~ 10974875 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CCTCTGCCCATCTTGACTTCTGAGAGACACTGCCACTCTGAGAGGCTCTTTTTATACCCAATCATGTTGCCAATTGACCTAATAAGTTGCAAATTGGTCCTCCAGCTGTCCCTTATATGTACATTTAACTTTTCCGGCCTCTTATTGCTACCTGTCCCAACTTTTTTGGAATGTGTAGCTCTCATGAAATCCAAAATGAGCCAATATTTGGCATGACATTTCAAAATGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114361 lncRNA downstream 17619 10956755 ~ 10957027 (-) True G100510
TU114359 lncRNA downstream 21171 10952943 ~ 10953475 (-) True G100508
TU114314 lncRNA downstream 80747 10893571 ~ 10893899 (-) True G100470
TU114313 lncRNA downstream 81529 10892877 ~ 10893117 (-) True G100469
TU114180 lncRNA downstream 210762 10753614 ~ 10763884 (-) False G100347
TU114365 lncRNA upstream 1279 10976154 ~ 10976460 (-) True G100514
TU114367 lncRNA upstream 6343 10981218 ~ 10981581 (-) True G100516
TU114380 lncRNA upstream 39819 11014694 ~ 11015416 (-) True G100529
TU114340 lncRNA upstream 93974 11068849 ~ 11086505 (-) True G100489
TU114336 lncRNA upstream 197904 11172779 ~ 11176544 (-) True G100486
CI01000016_10970952_10971167.mRNA mRNA downstream 3479 10970507 ~ 10971167 (-) True CI01000016_10970952_10971167
CI01000016_10931329_10940939.mRNA mRNA downstream 33593 10930812 ~ 10941053 (-) True CI01000016_10931329_10940939
CI01000016_10897488_10911334.mRNA mRNA downstream 63312 10896186 ~ 10911334 (-) True CI01000016_10897488_10911334
CI01000016_10799559_10842613.mRNA mRNA downstream 131237 10799185 ~ 10843409 (-) True CI01000016_10799559_10842613
CI01000016_10740961_10745890.mRNA mRNA downstream 228756 10739946 ~ 10745890 (-) True CI01000016_10740961_10745890
CI01000016_10989691_11026452.mRNA mRNA upstream 13502 10988377 ~ 11026452 (-) True CI01000016_10989691_11026452
CI01000016_11034620_11091604.mRNA mRNA upstream 59745 11034620 ~ 11091604 (-) True CI01000016_11034620_11091604
CI01000016_11161373_11165449.mRNA mRNA upstream 184493 11159368 ~ 11165449 (-) True CI01000016_11161373_11165449
CI01000016_11167265_11226409.mRNA mRNA upstream 192390 11167265 ~ 11226409 (-) True CI01000016_11167265_11226409
CI01000016_11353238_11464979.mRNA mRNA upstream 377858 11352733 ~ 11464979 (-) True CI01000016_11353238_11464979
TU114011 other downstream 922257 10051168 ~ 10052389 (-) True G100190
TU112845 other downstream 1159691 9814361 ~ 9814955 (-) True G99178
TU112535 other downstream 1462218 9511357 ~ 9511415 (-) True G98896
TU112534 other downstream 1462284 9511357 ~ 9511415 (-) False G98896

Expression Profile