RNA id: CI01000017_00687984_00689034.mRNA



Basic Information


Item Value
RNA id CI01000017_00687984_00689034.mRNA
length 832
RNA type mRNA
GC content 0.37
exon number 2
gene id CI01000017_00687984_00689034
representative True

Chromosome Information


Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 687984 ~ 689647 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTGAAAACAATCATTTGCACAGGAACCCTGCTCACTTTTCTAGTCCAGCCTGTATGGGTGGATTCAGCATCAGTGTGAAAACAACACCATCACACAGAGATAACCCATCAGTGAAGTTCATTTTGGGGAAAATGCATTTCCCTTCATTAACTGGAAGTAACCAGAAAGGCCAGTATCAGTTTACTGATGTCTTTACAGGGGCAGTGGAGCAGATGTAAACCAAACGGCTTCAGGAAATTACATGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCAGCTGTGTTTAGAGACTCAGTCTGTACAAAAGGTGAGATCTCATTCACAAACAGAGCTATAAAAGTGAGGAGGCTCATTAGAGGCCATTGTAGAGGACTGAAGGATCAGCGTTTGTCTCTCTCAGCTGCTCCTTTACAAAACCATAAAAAACTGGACAGATTTAGCGTCAGCCGCTGTCAGGTTGACAGTGAGATAAGAGCCACTATTACAGACGGATCCGCTCAAGTGCACCAGAACCGCTCTACTTCTGCTCACTTTGAGTCGTCTTGATTAGGATGATTGTTTCAAATGTACCTGCACTGAACGCTTTGATTTTACAATGCATGAAAAGTGGAACCAGAGATACTATGGTTGAGTGAATCTCACAAATATGTCTGCCACATTTCACCCTAAAAAAAAAAAAAAATATTATATATATATATATATATATATATATATATATATATGCTGCTACAATTTTTTTTAAATAAAAAAATTAATTAAAAAAAAATATTTTTATTTATTCTTTTTTTGTTCTAATTCTTTCTCCATACTATAATATTATATTACTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114694 lncRNA upstream 70962 604370 ~ 617022 (+) True G100805
TU114764 lncRNA upstream 206946 423599 ~ 481038 (+) True G100868
TU114696 lncRNA upstream 209553 417908 ~ 478431 (+) True G100807
TU114770 lncRNA upstream 236960 448507 ~ 451024 (+) True G100872
TU114760 lncRNA upstream 275871 411888 ~ 412113 (+) True G100864
TU114695 lncRNA downstream 927 690574 ~ 694968 (+) True G100806
TU114857 lncRNA downstream 198508 888155 ~ 888997 (+) True G100953
TU114864 lncRNA downstream 279835 969482 ~ 969796 (+) True G100958
TU114953 lncRNA downstream 332382 1022029 ~ 1076674 (+) True G101035
TU114951 lncRNA downstream 382615 1072262 ~ 1074172 (+) True G101034
CI01000017_00643676_00677273.mRNA mRNA upstream 10685 643676 ~ 677299 (+) True CI01000017_00643676_00677273
CI01000017_00565569_00581478.mRNA mRNA upstream 106353 564881 ~ 581631 (+) True CI01000017_00565569_00581478
CI01000017_00558732_00563124.mRNA mRNA upstream 124662 558732 ~ 563322 (+) True CI01000017_00558732_00563124
CI01000017_00542622_00545974.mRNA mRNA upstream 141680 542622 ~ 546304 (+) True CI01000017_00542622_00545974
CI01000017_00505305_00517048.mRNA mRNA upstream 170936 503745 ~ 517048 (+) True CI01000017_00505305_00517048
CI01000017_00722020_00762518.mRNA mRNA downstream 32373 722020 ~ 763373 (+) True CI01000017_00722020_00762518
CI01000017_00969981_00977045.mRNA mRNA downstream 280283 969930 ~ 977228 (+) False CI01000017_00969981_00977045
CI01000017_01057310_01063843.mRNA mRNA downstream 366582 1056229 ~ 1064326 (+) True CI01000017_01057310_01063843
CI01000017_01067189_01070509.mRNA mRNA downstream 377405 1067052 ~ 1070594 (+) True CI01000017_01067189_01070509
CI01000017_01104045_01131388.mRNA mRNA downstream 414398 1104045 ~ 1131465 (+) True CI01000017_01104045_01131388
TU114863 other downstream 237436 927083 ~ 969319 (+) True G100957

Expression Profile