RNA id: TU114857


Basic Information

Item Value
RNA id TU114857
length 258
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G100953
representative True

Chromosome Information

Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 888155 ~ 888997 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACTTGATCTCAACACATGCTGGTCTTGGTCTCGACTTGATCTCAACACATGCTGGTCTTGGTNTCGACTTGATCTCAACACATGCTTGTCTTGGTCTCGACTTGATCTCAATACACGCTGGTCTTGTTCTCGACTTGATCTCAACACATGCTCGTCTTGGTCTCGACTTGATCTCAACACATGCTCGTCTTGGTCTCGACTTGATCTCAACACATGCTTGTCTTGTTCTCGACTTGATCTCAACACATGCTGGTTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114695 lncRNA upstream 193187 690574 ~ 694968 (+) True G100806
TU114694 lncRNA upstream 271133 604370 ~ 617022 (+) True G100805
TU114764 lncRNA upstream 407117 423599 ~ 481038 (+) True G100868
TU114696 lncRNA upstream 409724 417908 ~ 478431 (+) True G100807
TU114770 lncRNA upstream 437131 448507 ~ 451024 (+) True G100872
TU114864 lncRNA downstream 80485 969482 ~ 969796 (+) True G100958
TU114953 lncRNA downstream 133032 1022029 ~ 1076674 (+) True G101035
TU114951 lncRNA downstream 183265 1072262 ~ 1074172 (+) True G101034
TU114966 lncRNA downstream 199391 1088388 ~ 1090576 (+) True G101039
TU115004 lncRNA downstream 258929 1147926 ~ 1148227 (+) True G101067
CI01000017_00722020_00762518.mRNA mRNA upstream 124782 722020 ~ 763373 (+) True CI01000017_00722020_00762518
CI01000017_00687984_00689034.mRNA mRNA upstream 198508 687984 ~ 689647 (+) True CI01000017_00687984_00689034
CI01000017_00643676_00677273.mRNA mRNA upstream 210856 643676 ~ 677299 (+) True CI01000017_00643676_00677273
CI01000017_00565569_00581478.mRNA mRNA upstream 306524 564881 ~ 581631 (+) True CI01000017_00565569_00581478
CI01000017_00558732_00563124.mRNA mRNA upstream 324833 558732 ~ 563322 (+) True CI01000017_00558732_00563124
CI01000017_00969981_00977045.mRNA mRNA downstream 80933 969930 ~ 977228 (+) False CI01000017_00969981_00977045
CI01000017_01057310_01063843.mRNA mRNA downstream 167232 1056229 ~ 1064326 (+) True CI01000017_01057310_01063843
CI01000017_01067189_01070509.mRNA mRNA downstream 178055 1067052 ~ 1070594 (+) True CI01000017_01067189_01070509
CI01000017_01104045_01131388.mRNA mRNA downstream 215048 1104045 ~ 1131465 (+) True CI01000017_01104045_01131388
CI01000017_01534818_01538322.mRNA mRNA downstream 645279 1534276 ~ 1538593 (+) True CI01000017_01534818_01538322
TU114863 other downstream 38086 927083 ~ 969319 (+) True G100957

Expression Profile