RNA id: TU116093



Basic Information


Item Value
RNA id TU116093
length 599
lncRNA type intronic
GC content 0.34
exon number 3
gene id G102044
representative False

Chromosome Information


Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 2099502 ~ 2101068 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGCGCGTGCACATGAATGCGTGACATCAGTGGCAAACAGCCAATCACATGCCTTGCAACAGAAAGAAACTGTGATTTACTTCTCGCGAGAGAGTCAACGTGATTCAAAACTCTTTTGCTGAAGAAAATGAAGAATTTAAACGCATTTACACTAAAGAAGAAACTTGTCCATGAAAAAGGACAAATAAAAGAAATTATCTTGCTCTATCAGAGCAAGTGAAAATTGTCAAGTGTTTGTATAGTTTATTATATACAGCAATAGAGACTCAAACATGTAAGGTTATGTAGTCATTTTTAAAGAGTTATCTGTTGATTCTACATTCTGTATATATTAATATTTATTTAAAATAAATGCTTAATAATAACTGTTAAACTAAAATTGCTTGTGTGAAATGGATTAATAATATAGATCATATAATAATTATTTATCTTTAATTTGGAGGAAGAGAAACTGGGGGAGGGACTTTATTGCGTTGGATGTGTCAGTGTCACTTTGCTCACATCTGATTGGTCCAATTTCGGTTTGAGATCTCTTACCCAGAACATAACCTGCCCCGGAGCAGGTTAGCTGTGGAGCGTAAGTTACTATGGTGATAAACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU116085 lncRNA upstream 14528 2078266 ~ 2084974 (+) True G102039
TU115920 lncRNA upstream 115795 1983469 ~ 1983707 (+) True G101891
TU115916 lncRNA upstream 118004 1981230 ~ 1981498 (+) True G101887
TU115912 lncRNA upstream 121559 1977675 ~ 1977943 (+) True G101883
TU115849 lncRNA upstream 142849 1844454 ~ 1956653 (+) True G101821
TU116096 lncRNA downstream 2334 2103402 ~ 2103811 (+) True G102046
TU116161 lncRNA downstream 26421 2127489 ~ 2129122 (+) True G102093
TU116162 lncRNA downstream 27644 2128712 ~ 2130482 (+) True G102094
CI01000017_02061927_02067003.mRNA mRNA upstream 32324 2061866 ~ 2067178 (+) True CI01000017_02061927_02067003
CI01000017_02052993_02060890.mRNA mRNA upstream 37938 2052993 ~ 2061564 (+) True CI01000017_02052993_02060890
CI01000017_01910759_01910947.mRNA mRNA upstream 188446 1910759 ~ 1911056 (+) True CI01000017_01910759_01910947
CI01000017_01737674_01834279.mRNA mRNA upstream 265128 1736565 ~ 1834374 (+) True CI01000017_01737674_01834279
CI01000017_01654491_01655975.mRNA mRNA upstream 443320 1654410 ~ 1656182 (+) True CI01000017_01654491_01655975
TU114863 other upstream 1130183 927083 ~ 969319 (+) True G100957

Expression Profile