RNA id: TU121056


Basic Information

Item Value
RNA id TU121056
length 85
RNA type TUCP
GC content 0.41
exon number 1
gene id G106487
representative True

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6641872 ~ 6641956 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACTATACATGACACACAAATAGTTTTATATTATGTGATTATGAAGCTGGTGATCTTGCTGTGGATTCTGCCTGTAACTTTAGGAGACATCTATGTCACCTGTATCTACTCTGAGGAATGTGTGTTACCTTGCACATCCACCAACCTCGACATTATCCACTGGTACAAGGATAGTAATCCAGTGCATTCATTCTACCACAATAAAGACCAGTTGGACCATCAGTCTGAGGACTACAAGGGAAGAACATCATTGTTCCCGGAATCTGAAATCAAAAATGGAAATGTATCACTCTTACTAAAAAACATCAGAGTCCAAGATGAAGGCAGATACAGGTGCTATGCTGCCAATGAAAAAACAAATGATGAGAAGTTTGTGTCTGTGTCTGTAGAAGCTCCAGCTAAATCAGTGGATATCACTTTAAAAGATGATACAGTTATCTGCACCACCAGTGGAGTTTATCCAAAACCACACGTCTTGTGGTCCCCAGAGCCACCGGCAGAGGAGACATTGAATACTTTCCAGCAAACAGAAGAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121046 lncRNA downstream 93387 6545849 ~ 6547225 (-) True CI01000018_06547019_06585316
TU121119 lncRNA downstream 99938 6540436 ~ 6540674 (-) True G106543
TU121117 lncRNA downstream 102445 6537883 ~ 6538167 (-) True G106541
TU121115 lncRNA downstream 103964 6536343 ~ 6536648 (-) True G106539
TU121068 lncRNA downstream 148849 6491240 ~ 6491763 (-) True G106495
TU121168 lncRNA upstream 65828 6707784 ~ 6707988 (-) True G106579
TU121170 lncRNA upstream 71847 6713803 ~ 6714006 (-) True G106581
TU121179 lncRNA upstream 88584 6731129 ~ 6731257 (-) True G106590
TU121279 lncRNA upstream 382115 7024071 ~ 7024676 (-) True G106663
TU121288 lncRNA upstream 383715 7025671 ~ 7033706 (-) True G106672
CI01000018_06598234_06605351.mRNA mRNA downstream 34678 6597981 ~ 6605934 (-) True CI01000018_06598234_06605351
CI01000018_06547019_06585316.mRNA mRNA downstream 55296 6546386 ~ 6585316 (-) False CI01000018_06547019_06585316
CI01000018_06503908_06515370.mRNA mRNA downstream 125242 6503782 ~ 6515370 (-) True CI01000018_06503908_06515370
CI01000018_06493607_06502730.mRNA mRNA downstream 137882 6493345 ~ 6502730 (-) True CI01000018_06493607_06502730
CI01000018_06484577_06490112.mRNA mRNA downstream 150500 6484577 ~ 6490112 (-) True CI01000018_06484577_06490112
CI01000018_06665847_06684600.mRNA mRNA upstream 23831 6665787 ~ 6684600 (-) True CI01000018_06665847_06684600
CI01000018_06696391_06705674.mRNA mRNA upstream 53802 6695758 ~ 6705674 (-) True CI01000018_06696391_06705674
CI01000018_06730933_06741559.mRNA mRNA upstream 88391 6730347 ~ 6742049 (-) False CI01000018_06730933_06741559
CI01000018_06757523_06763462.mRNA mRNA upstream 114800 6756756 ~ 6764763 (-) True CI01000018_06757523_06763462
CI01000018_06789511_06854837.mRNA mRNA upstream 147339 6789295 ~ 6854837 (-) True CI01000018_06789511_06854837
TU121114 other downstream 107100 6530447 ~ 6533512 (-) True G106538
TU120472 other downstream 614736 5891336 ~ 6023917 (-) True G105976
TU120471 other downstream 614736 5957606 ~ 6023917 (-) True G105976
TU119553 other downstream 1764773 4855081 ~ 4875839 (-) True CI01000018_04856240_04875704
TU119577 other downstream 2394602 4243467 ~ 4246010 (-) True G105200

Expression Profile