RNA id: TU119691


Basic Information

Item Value
RNA id TU119691
length 292
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G105304
representative True

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4432191 ~ 4432482 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTCAGGGATGACGTGTTTTTGTAGGCCAACCCGGAAGTTAGCGGCGCACGGGTTCCCTCGATCGAAAGCCTATGCATTTTTCCCATAGACTTTTGGAAAATCGCAAAAAATAAGCTCTGTGTTTAACAAAGGGTTATGACACTTACACGTTTTGTCTATCAAGATAATCTTTACAAGTTAACACAACATTTATACATTTTGAAGCCTAAATAAAGTCGTCAGATATAAAAAGCTAACAGTAGGCTATAAACGGACTACAGCACACTATGGTCGCGGATCAACGTCACCACCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119664 lncRNA downstream 146199 4285739 ~ 4285992 (-) True G105277
TU119556 lncRNA downstream 194056 4234605 ~ 4238135 (-) False G105185
TU119557 lncRNA downstream 194056 4234605 ~ 4238135 (-) True G105185
TU119641 lncRNA downstream 213282 4218678 ~ 4218909 (-) True G105263
TU119639 lncRNA downstream 220933 4210897 ~ 4211258 (-) True G105261
TU119693 lncRNA upstream 12320 4444802 ~ 4445367 (-) True G105306
TU119696 lncRNA upstream 21779 4454261 ~ 4454478 (-) True G105307
TU119591 lncRNA upstream 152146 4584628 ~ 4587775 (-) True G105213
TU119575 lncRNA upstream 180215 4612697 ~ 4615380 (-) False G105199
TU119574 lncRNA upstream 182272 4614754 ~ 4615380 (-) True G105199
CI01000018_04397198_04411105.mRNA mRNA downstream 21086 4396649 ~ 4411105 (-) True CI01000018_04397198_04411105
CI01000018_04361150_04364887.mRNA mRNA downstream 67304 4360619 ~ 4364887 (-) True CI01000018_04361150_04364887
CI01000018_04344907_04359005.mRNA mRNA downstream 73186 4344091 ~ 4359005 (-) True CI01000018_04344907_04359005
CI01000018_04336914_04342114.mRNA mRNA downstream 90077 4336589 ~ 4342114 (-) True CI01000018_04336914_04342114
CI01000018_04307560_04321214.mRNA mRNA downstream 109905 4306921 ~ 4322286 (-) True CI01000018_04307560_04321214
CI01000018_04464837_04473051.mRNA mRNA upstream 32156 4464638 ~ 4473051 (-) True CI01000018_04464837_04473051
CI01000018_04491510_04539751.mRNA mRNA upstream 58753 4491235 ~ 4539751 (-) True CI01000018_04491510_04539751
CI01000018_04557779_04561445.mRNA mRNA upstream 125154 4557636 ~ 4561997 (-) True CI01000018_04557779_04561445
CI01000018_04595424_04596449.mRNA mRNA upstream 161983 4594465 ~ 4597587 (-) True CI01000018_04595424_04596449
CI01000018_04604468_04611851.mRNA mRNA upstream 171305 4603787 ~ 4611851 (-) True CI01000018_04604468_04611851
TU119577 other downstream 186181 4243467 ~ 4246010 (-) True G105200
TU119461 other downstream 414374 4007697 ~ 4017817 (-) False G105104
TU119464 other downstream 421616 4007697 ~ 4010575 (-) True G105104
TU119324 other downstream 931677 3482104 ~ 3500514 (-) True G104968
TU118149 other downstream 2031288 2386208 ~ 2400903 (-) True G103873
TU119553 other upstream 422599 4855081 ~ 4875839 (-) True CI01000018_04856240_04875704
TU120472 other upstream 1458854 5891336 ~ 6023917 (-) True G105976
TU120471 other upstream 1525124 5957606 ~ 6023917 (-) True G105976
TU121114 other upstream 2097965 6530447 ~ 6533512 (-) True G106538
TU121056 other upstream 2208130 6641872 ~ 6641956 (-) True G106487

Expression Profile