Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000020_03660304_03682653.mRNA |
| length | 5983 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 36 |
| gene id | CI01000020_03660304_03682653 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 3660304 ~ 3683035 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0008360 | regulation of cell shape | biological_process |
| id | description |
|---|---|
| K06821 | PLXNB; plexin B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU128123 | lncRNA | upstream | 104355 | 3555249 ~ 3555949 (+) | True | G112768 |
| TU128121 | lncRNA | upstream | 143799 | 3516132 ~ 3516505 (+) | True | G112766 |
| TU128145 | lncRNA | upstream | 161080 | 3498805 ~ 3499224 (+) | True | G112790 |
| TU128144 | lncRNA | upstream | 162972 | 3497075 ~ 3497332 (+) | True | G112789 |
| TU128143 | lncRNA | upstream | 163913 | 3496182 ~ 3496391 (+) | True | G112788 |
| TU128115 | lncRNA | downstream | 6421 | 3689456 ~ 3696142 (+) | True | G112760 |
| TU128124 | lncRNA | downstream | 13550 | 3696585 ~ 3697508 (+) | True | G112769 |
| TU128161 | lncRNA | downstream | 30197 | 3713232 ~ 3713845 (+) | True | G112806 |
| TU128175 | lncRNA | downstream | 63347 | 3746382 ~ 3746615 (+) | True | G112819 |
| TU128183 | lncRNA | downstream | 74826 | 3757861 ~ 3758199 (+) | True | G112827 |
| CI01000020_03632947_03634207.mRNA | mRNA | upstream | 26026 | 3632947 ~ 3634278 (+) | True | CI01000020_03632947_03634207 |
| CI01000020_03623678_03625344.mRNA | mRNA | upstream | 34280 | 3623534 ~ 3626024 (+) | True | CI01000020_03623678_03625344 |
| CI01000020_03405045_03408250.mRNA | mRNA | upstream | 252031 | 3405045 ~ 3408273 (+) | True | CI01000020_03405045_03408250 |
| CI01000020_03397866_03404516.mRNA | mRNA | upstream | 255594 | 3397866 ~ 3404710 (+) | True | CI01000020_03397866_03404516 |
| CI01000020_03379393_03391963.mRNA | mRNA | upstream | 267202 | 3379393 ~ 3393102 (+) | True | CI01000020_03379393_03391963 |
| CI01000020_03761716_03806609.mRNA | mRNA | downstream | 78681 | 3761716 ~ 3806914 (+) | True | CI01000020_03761716_03806609 |
| CI01000020_03840431_03846507.mRNA | mRNA | downstream | 156567 | 3839602 ~ 3847229 (+) | True | CI01000020_03840431_03846507 |
| CI01000020_03848839_03853256.mRNA | mRNA | downstream | 165804 | 3848839 ~ 3853630 (+) | True | CI01000020_03848839_03853256 |
| CI01000020_03957225_03966342.mRNA | mRNA | downstream | 274190 | 3957225 ~ 3966942 (+) | True | CI01000020_03957225_03966342 |
| CI01000020_03985890_03988606.mRNA | mRNA | downstream | 302855 | 3985890 ~ 3988936 (+) | True | CI01000020_03985890_03988606 |
| TU128026 | other | upstream | 356574 | 3301171 ~ 3303730 (+) | True | G112679 |
| TU126334 | other | upstream | 1001391 | 2647511 ~ 2658913 (+) | True | G111183 |
| TU126324 | other | upstream | 1210497 | 2445064 ~ 2449807 (+) | True | G111173 |
| TU126322 | other | upstream | 1214748 | 2445064 ~ 2445556 (+) | False | G111173 |
| TU126005 | other | upstream | 2281955 | 1376369 ~ 1378349 (+) | True | CI01000020_01375811_01378288 |
| TU128103 | other | downstream | 31346 | 3714381 ~ 3733586 (+) | True | G112753 |
| TU128448 | other | downstream | 743623 | 4426658 ~ 4439762 (+) | True | G113050 |
| TU128442 | other | downstream | 1076977 | 4785073 ~ 4793261 (+) | True | G113044 |
| TU128430 | other | downstream | 1123992 | 4807027 ~ 4808872 (+) | False | CI01000020_04807118_04808453 |
| TU128431 | other | downstream | 1123992 | 4823772 ~ 4823786 (+) | True | G113036 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00055552 | False | 5760 | mRNA | 0.48 | 35 | NC_007115.7 | 14450787 ~ 14486822 (-) |
