Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000021_01771612_01785627.mRNA |
| length | 2863 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 22 |
| gene id | CI01000021_01771612_01785627 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000021 |
| NCBI id | null |
| chromosome length | 7014339 |
| location | 1771389 ~ 1785666 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| id | description |
|---|---|
| K12591 | RRP6, EXOSC10; exosome complex exonuclease RRP6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131727 | lncRNA | upstream | 1186 | 1769972 ~ 1770203 (+) | True | G115968 |
| TU131717 | lncRNA | upstream | 98579 | 1672470 ~ 1672810 (+) | True | G115959 |
| TU131699 | lncRNA | upstream | 125511 | 1645599 ~ 1645878 (+) | True | G115941 |
| TU131623 | lncRNA | upstream | 254447 | 1516681 ~ 1516942 (+) | True | G115870 |
| TU131575 | lncRNA | upstream | 265247 | 1496436 ~ 1506142 (+) | True | G115836 |
| TU131728 | lncRNA | downstream | 15492 | 1801158 ~ 1802398 (+) | True | G115969 |
| TU131729 | lncRNA | downstream | 16746 | 1802412 ~ 1803161 (+) | True | G115970 |
| TU131735 | lncRNA | downstream | 25217 | 1810883 ~ 1811363 (+) | True | G115973 |
| TU131577 | lncRNA | downstream | 26280 | 1811946 ~ 1876510 (+) | True | G115837 |
| TU131738 | lncRNA | downstream | 29032 | 1814698 ~ 1814987 (+) | True | G115976 |
| CI01000021_01717640_01718394.mRNA | mRNA | upstream | 52510 | 1717640 ~ 1718879 (+) | True | CI01000021_01717640_01718394 |
| CI01000021_01519982_01528860.mRNA | mRNA | upstream | 242284 | 1519982 ~ 1529105 (+) | True | CI01000021_01519982_01528860 |
| CI01000021_01506852_01513139.mRNA | mRNA | upstream | 258083 | 1506216 ~ 1513306 (+) | True | CI01000021_01506852_01513139 |
| CI01000021_01463736_01472529.mRNA | mRNA | upstream | 298503 | 1463736 ~ 1472886 (+) | True | CI01000021_01463736_01472529 |
| CI01000021_01332646_01333910.mRNA | mRNA | upstream | 437438 | 1331665 ~ 1333951 (+) | False | CI01000021_01332646_01333910 |
| CI01000021_01977248_01980449.mRNA | mRNA | downstream | 191273 | 1976939 ~ 1980506 (+) | True | CI01000021_01977248_01980449 |
| CI01000021_02230472_02252713.mRNA | mRNA | downstream | 444325 | 2229991 ~ 2253146 (+) | True | CI01000021_02230472_02252713 |
| CI01000021_02269000_02272309.mRNA | mRNA | downstream | 483023 | 2268689 ~ 2272396 (+) | True | CI01000021_02269000_02272309 |
| CI01000021_02322467_02328819.mRNA | mRNA | downstream | 536801 | 2322467 ~ 2329864 (+) | True | CI01000021_02322467_02328819 |
| CI01000021_02331361_02334546.mRNA | mRNA | downstream | 545484 | 2331150 ~ 2334622 (+) | True | CI01000021_02331361_02334546 |
| TU131419 | other | upstream | 436980 | 1333998 ~ 1334409 (+) | True | G115691 |
| TU131221 | other | upstream | 1287425 | 480530 ~ 483964 (+) | True | G115519 |
| TU132002 | other | downstream | 504151 | 2289817 ~ 2297195 (+) | True | G116236 |
| TU133219 | other | downstream | 1452188 | 3237854 ~ 3243364 (+) | True | G117237 |
| TU133183 | other | downstream | 1483478 | 3269144 ~ 3328233 (+) | False | G117202 |
| TU133182 | other | downstream | 1538606 | 3324272 ~ 3328233 (+) | True | G117202 |
| TU133500 | other | downstream | 2170480 | 3956146 ~ 3957752 (+) | True | G117484 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00042785 | True | 2964 | mRNA | 0.48 | 25 | NC_007134.7 | 14771979 ~ 14803801 (+) |
