RNA id: CI01000026_14684215_14684738.mRNA


Basic Information

Item Value
RNA id CI01000026_14684215_14684738.mRNA
length 548
RNA type mRNA
GC content 0.35
exon number 3
gene id CI01000026_14684215_14684738
representative True

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 14684203 ~ 14685091 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTGTGAATTCAAGTAATAAGTAGAATTTTCTTAAAGTATGCTTAAAGACTTGCTCAAAATTTCTGTATGCAAGTATAATAATAATAATGCGTACTTATTTTGTCATTTATATTTTAGTGACGATTAAAAAATTATGACTTTTATTTTGACATGTTTTGGTTGCTCATTAGTGTAGCACGTAACACTTCAAGTTTTGAGCATCGTCACACTAGCTTATATGTATATGTAACTACTAAACGTCGATTAAACAAGCGAGATGATTGTTAACTCTTTAAAAAAGTTTTGCCGCGTTGTCTTGCCTCTGTGTTCACACAAATCTCTGTTAACAGATGTACTCCGACAAACACCTGCAATGGGAAAGCATTTCATCAGACATTCGCGCAGCAGCAGCAGCACATCTCTCACTCACAGAAAACTGGTTAGAAACGGCGAAGAGAAGAAATTAGTGATTTGGTTAGAGGGAAATATTGCAAGTGGAAAGACAACATGTCTGGAGTACTTCAGCAAAACCAGTGACATTGAGGTAATGCAGTAAATGTATAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU154766 lncRNA downstream 17626 14666345 ~ 14666577 (-) True G136170
TU154752 lncRNA downstream 46223 14637520 ~ 14637980 (-) True G136156
TU154688 lncRNA downstream 48200 14589930 ~ 14636003 (-) True G136103
TU154720 lncRNA downstream 76624 14606651 ~ 14607579 (-) True G136129
TU154694 lncRNA downstream 104885 14576171 ~ 14579318 (-) True G136107
TU154815 lncRNA upstream 166676 14851767 ~ 14852100 (-) True G136214
TU154946 lncRNA upstream 374859 15059950 ~ 15060174 (-) True G136344
TU154979 lncRNA upstream 391720 15076811 ~ 15077839 (-) True G136377
TU155222 lncRNA upstream 658119 15343210 ~ 15343413 (-) True G136609
TU155488 lncRNA upstream 722421 15407512 ~ 15407792 (-) True G136845
CI01000026_14680424_14682203.mRNA mRNA downstream 2000 14680359 ~ 14682203 (-) True CI01000026_14680424_14682203
CI01000026_14376741_14381102.mRNA mRNA downstream 302110 14376570 ~ 14382093 (-) True CI01000026_14376741_14381102
CI01000026_14156809_14170720.mRNA mRNA downstream 513483 14156349 ~ 14170720 (-) True CI01000026_14156809_14170720
CI01000026_13744060_13791879.mRNA mRNA downstream 892324 13744060 ~ 13791879 (-) True CI01000026_13744060_13791879
CI01000026_13299234_13300178.mRNA mRNA downstream 1383263 13298482 ~ 13300940 (-) False CI01000026_13299234_13300178
CI01000026_14697383_14715245.mRNA mRNA upstream 11952 14697043 ~ 14715245 (-) True CI01000026_14697383_14715245
CI01000026_14720591_14737569.mRNA mRNA upstream 34725 14719816 ~ 14737569 (-) True CI01000026_14720591_14737569
CI01000026_14780225_14789500.mRNA mRNA upstream 94997 14780088 ~ 14790709 (-) True CI01000026_14780225_14789500
CI01000026_14823390_14854983.mRNA mRNA upstream 137916 14823007 ~ 14854983 (-) True CI01000026_14823390_14854983
CI01000026_14862414_14863954.mRNA mRNA upstream 176698 14861789 ~ 14863994 (-) True CI01000026_14862414_14863954
TU154700 other downstream 128767 14554917 ~ 14555436 (-) True G136110
TU152172 other downstream 3377022 11301915 ~ 11307181 (-) True G133802
TU152150 other downstream 3846598 10834015 ~ 10837605 (-) False G133790
TU152144 other downstream 3894049 10790055 ~ 10790154 (-) True G133789
TU156370 other upstream 2071638 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU156388 other upstream 2121273 16806364 ~ 16808372 (-) True G137667
TU156657 other upstream 2298160 16983251 ~ 16984352 (-) True G137914
TU156715 other upstream 2383257 17068348 ~ 17069433 (-) True G137967

Expression Profile