RNA id: CI01000026_15617263_15620665.mRNA



Basic Information


Item Value
RNA id CI01000026_15617263_15620665.mRNA
length 1144
RNA type mRNA
GC content 0.47
exon number 4
gene id CI01000026_15617263_15620665
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 15616920 ~ 15620947 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATACCTGAAATCCAGACATGCCCCACTGAAGCAATCACACTTATTCATCCTTGATTTATAAAGCTGGTCGACGTTAAGCCTTGAGTTTGTGCTAAGAGGGTTGCCCTTTGACCTTTAGGATAACCCCAGTTTGTTTGCATTTCTGTATGAATGCGTGTGGCGTCTGCAGTAGAGCGTGTAGAAACGCTTTTCTCCGACTGGTCACCTTTTCAATGTCCATCAGGATTTCCTCACTAATCCCAATGGATCATCCTATCAGTGCTTAAAGCATGTTTATGTGTAATGGAATCCATCTTTCTCGATTCATACCACTCCCCCTGCTTCTCCCTCTGCTTTCTTCCCAATTTTTTTATCAAATTTTCCTTAGGCCAGCAGTTCTCTCGTTTTGAGAACAGACTTCTCAGCTCCTCTCAAACACCTGCTCTATTCCTCCACACAGTCCCACGATGCTCTCTTCTCTCCAGCTATTTCTCTCTCTTCCTAGGCTTGAAGCAGACACAGAAACCCCACATCACATTTCTCTTTCTCTCTTTCTCTCGTGCGCGCTCTGCTACGGCTGTGGTTAGGGCGCTCACTGAGGCGTTGCGAGTTAAGTGGCCTGCCCAGAGGGAGCGTGGAGCTACGCCGTGGCCCACCTGGGCCTTGATCCCGAGACCCCCTGCGCCTCCAGTCGTGTGGGTTTGGAGTGGATTGGATCGTCCACATTACCACAGGCTGATCTATACTGACAGCCTTATTTACAAAAACATGGGGAAGAGTAACAAGGCAAGTTACCCCACACTCTCTCCTTCACTCACTTAACTTAGCTTTCTCCCAATTACAACGATTGGCACAGACGCCATAACAAAAGAGATGAAACGGGCAACTTAAGAGACAGACAACAACACTTCGTGATCAAGACTGAAAAAAAAAGGGAGCAGGCGAGAGAACAAAAACAATAACAGACAAGAAAGGGGGAGAGGGAAAAGAAGCTGAATTGTGAAAATTGGCGGAGATTGTGGGAGATGTGTTATGGGTAAGCGTCAGCAGGAGGGGAGAAACACATCTTAAGACTTAAAAGGTGTGTAAAGTAAGCTGAGCATCGGGGGAATTCTCTCCGAGAGCCCCTTTAAAATTCACCTCTGTATTAAGGCAGATAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155603 lncRNA downstream 27660 15589031 ~ 15589260 (-) True G136957
TU155592 lncRNA downstream 40454 15576241 ~ 15576466 (-) True G136946
TU155581 lncRNA downstream 49126 15567059 ~ 15567794 (-) True G136935
TU155570 lncRNA downstream 58835 15557809 ~ 15558085 (-) True G136924
TU155511 lncRNA downstream 142212 15474504 ~ 15474708 (-) True G136865
TU155654 lncRNA upstream 57911 15678858 ~ 15679642 (-) True G137006
TU155641 lncRNA upstream 94586 15715533 ~ 15716625 (-) True G136993
TU155692 lncRNA upstream 149701 15770648 ~ 15777288 (-) True G137042
TU155744 lncRNA upstream 230418 15851365 ~ 15851646 (-) True G137092
TU155746 lncRNA upstream 234054 15855001 ~ 15855278 (-) True G137094
CI01000026_15604078_15614242.mRNA mRNA downstream 2265 15603964 ~ 15614655 (-) True CI01000026_15604078_15614242
CI01000026_15457228_15461956.mRNA mRNA downstream 154964 15457198 ~ 15461956 (-) True CI01000026_15457228_15461956
CI01000026_15444272_15445552.mRNA mRNA downstream 171368 15444052 ~ 15445552 (-) True CI01000026_15444272_15445552
CI01000026_15410940_15426472.mRNA mRNA downstream 190448 15410800 ~ 15426472 (-) True CI01000026_15410940_15426472
CI01000026_15217144_15334733.mRNA mRNA downstream 281745 15216946 ~ 15335175 (-) True CI01000026_15217144_15334733
CI01000026_15780006_15782114.mRNA mRNA upstream 158703 15779650 ~ 15782275 (-) True CI01000026_15780006_15782114
CI01000026_15930136_15933539.mRNA mRNA upstream 308856 15929803 ~ 15933539 (-) True CI01000026_15930136_15933539
CI01000026_16297047_16419596.mRNA mRNA upstream 675695 16296642 ~ 16419739 (-) True CI01000026_16297047_16419596
CI01000026_16432592_16456842.mRNA mRNA upstream 811580 16432527 ~ 16456842 (-) True CI01000026_16432592_16456842
CI01000026_16553812_16554906.mRNA mRNA upstream 932435 16553382 ~ 16555883 (-) True CI01000026_16553812_16554906
TU154700 other downstream 1061484 14554917 ~ 14555436 (-) True G136110
TU152172 other downstream 4309739 11301915 ~ 11307181 (-) True G133802
TU152150 other downstream 4779315 10834015 ~ 10837605 (-) False G133790
TU152144 other downstream 4826766 10790055 ~ 10790154 (-) True G133789
TU156370 other upstream 1135782 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU156388 other upstream 1185417 16806364 ~ 16808372 (-) True G137667
TU156657 other upstream 1362304 16983251 ~ 16984352 (-) True G137914
TU156715 other upstream 1447401 17068348 ~ 17069433 (-) True G137967

Expression Profile