RNA id: TU150419


Basic Information

Item Value
RNA id TU150419
length 203
lncRNA type inter_gene
GC content 0.29
exon number 2
gene id G132275
representative True

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9011514 ~ 9058423 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGTGGTGTAATACTACCAAAAAATTATAATCATGACCTTTATCTCCATACCAAAATCCCAGATGGCCAGACAGTGATTCATCTTATAAATTGTTAATATATTAATGTCTGTGACGCTGTGAGCATGGAGACTGTTGTGTAGACTGTAAGTATTTTAAATGTTTAACTTTTTAAAATGTTAAATGTTTAATATAAATAAATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150363 lncRNA upstream 42024 8969151 ~ 8969490 (+) True G132219
TU150173 lncRNA upstream 68415 8942854 ~ 8943099 (+) True G132043
TU150171 lncRNA upstream 70275 8940475 ~ 8941239 (+) True G132041
TU150093 lncRNA upstream 123139 8887122 ~ 8888375 (+) True G131963
TU150085 lncRNA upstream 147118 8862513 ~ 8864396 (+) True G131960
TU150437 lncRNA downstream 385 9058808 ~ 9059309 (+) True G132289
TU150455 lncRNA downstream 33642 9092065 ~ 9092387 (+) True G132302
TU150459 lncRNA downstream 42226 9100649 ~ 9100890 (+) True G132306
TU150468 lncRNA downstream 59240 9117663 ~ 9117942 (+) True G132315
TU150469 lncRNA downstream 59796 9118219 ~ 9118633 (+) True G132316
CI01000026_08950735_08960908.mRNA mRNA upstream 50368 8950663 ~ 8961146 (+) True CI01000026_08950735_08960908
CI01000026_08944583_08947981.mRNA mRNA upstream 63521 8944526 ~ 8947993 (+) True CI01000026_08944583_08947981
CI01000026_08474877_08483134.mRNA mRNA upstream 528246 8474877 ~ 8483268 (+) True CI01000026_08474877_08483134
CI01000026_08454661_08461606.mRNA mRNA upstream 549593 8454661 ~ 8461921 (+) True CI01000026_08454661_08461606
CI01000026_08447474_08449558.mRNA mRNA upstream 560903 8447396 ~ 8450611 (+) True CI01000026_08447474_08449558
CI01000026_09076625_09079154.mRNA mRNA downstream 16793 9075216 ~ 9079338 (+) True CI01000026_09076625_09079154
CI01000026_09175446_09178464.mRNA mRNA downstream 116826 9175249 ~ 9178488 (+) True CI01000026_09175446_09178464
CI01000026_09339450_09352303.mRNA mRNA downstream 281027 9339450 ~ 9353177 (+) True CI01000026_09339450_09352303
CI01000026_09365911_09428712.mRNA mRNA downstream 306484 9364907 ~ 9429076 (+) True CI01000026_09365911_09428712
CI01000026_09602263_09635635.mRNA mRNA downstream 543220 9601643 ~ 9636994 (+) True CI01000026_09602263_09635635
TU149067 other upstream 504727 8501408 ~ 8506787 (+) True G131077
TU148972 other upstream 712100 8298573 ~ 8299414 (+) False CI01000026_08297901_08307596
TU148937 other upstream 822441 8188374 ~ 8189073 (+) True G130967
TU148442 other upstream 1914862 7095053 ~ 7096652 (+) True G130552
TU146290 other upstream 2684729 6326278 ~ 6326785 (+) True G128757
TU150881 other downstream 510316 9568739 ~ 9569160 (+) False G132667
TU151441 other downstream 1101396 10159819 ~ 10161961 (+) True G133192
TU151694 other downstream 2012345 11070768 ~ 11070876 (+) True G133429
TU151777 other downstream 2186510 11244933 ~ 11255073 (+) True G133497
TU151829 other downstream 2417694 11476117 ~ 11476907 (+) False G133542

Expression Profile