RNA id: TU151203


Basic Information

Item Value
RNA id TU151203
length 202
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G132974
representative True

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10022076 ~ 10022277 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CATACATTCAAATTTGAACTGCAATTTTGCATTCTGTTTCTTAGTTCAATTTGAATTGAATTCAAATTCAAGAACTGAACTGGGATTTAAAAGGCATTCTCAGTTCAATTCTGAATGATGCACAACCCTGGTTGGAAGAATTTGAGAGAGCATAATAAACAATTCTGAACCACAGTAATGGGCATTTTCTTCCATTAAGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151178 lncRNA upstream 33413 9988139 ~ 9988663 (+) True G132949
TU151179 lncRNA upstream 38156 9983027 ~ 9983920 (+) True G132950
TU151180 lncRNA upstream 42977 9978473 ~ 9979099 (+) True G132951
TU151182 lncRNA upstream 91363 9930485 ~ 9930713 (+) True G132953
TU151024 lncRNA upstream 101988 9919386 ~ 9920088 (+) True G132800
TU151206 lncRNA downstream 7962 10030239 ~ 10030511 (+) True G132977
TU151398 lncRNA downstream 46299 10068576 ~ 10068873 (+) True G133153
TU151437 lncRNA downstream 79742 10102019 ~ 10152201 (+) True G133188
TU151542 lncRNA downstream 247790 10270067 ~ 10270293 (+) True G133281
TU151546 lncRNA downstream 255288 10277565 ~ 10277783 (+) True G133285
CI01000026_09915483_09917692.mRNA mRNA upstream 104157 9915445 ~ 9917919 (+) True CI01000026_09915483_09917692
CI01000026_09900193_09906874.mRNA mRNA upstream 114839 9900193 ~ 9907237 (+) True CI01000026_09900193_09906874
CI01000026_09666763_09669325.mRNA mRNA upstream 352374 9666680 ~ 9669702 (+) True CI01000026_09666763_09669325
CI01000026_09602263_09635635.mRNA mRNA upstream 385082 9601643 ~ 9636994 (+) True CI01000026_09602263_09635635
CI01000026_09365911_09428712.mRNA mRNA upstream 593000 9364907 ~ 9429076 (+) True CI01000026_09365911_09428712
CI01000026_10124232_10124468.mRNA mRNA downstream 101639 10123916 ~ 10125835 (+) True CI01000026_10124232_10124468
CI01000026_10136110_10149386.mRNA mRNA downstream 113719 10135996 ~ 10149466 (+) True CI01000026_10136110_10149386
CI01000026_10200749_10202405.mRNA mRNA downstream 176316 10198593 ~ 10202514 (+) True CI01000026_10200749_10202405
CI01000026_10265012_10268157.mRNA mRNA downstream 242668 10264945 ~ 10268548 (+) True CI01000026_10265012_10268157
CI01000026_10315650_10317985.mRNA mRNA downstream 292802 10315079 ~ 10317990 (+) False CI01000026_10315650_10317985
TU150881 other upstream 452916 9568739 ~ 9569160 (+) False G132667
TU149067 other upstream 1515289 8501408 ~ 8506787 (+) True G131077
TU148972 other upstream 1722662 8298573 ~ 8299414 (+) False CI01000026_08297901_08307596
TU148937 other upstream 1833003 8188374 ~ 8189073 (+) True G130967
TU148442 other upstream 2925424 7095053 ~ 7096652 (+) True G130552
TU151441 other downstream 137542 10159819 ~ 10161961 (+) True G133192
TU151694 other downstream 1048491 11070768 ~ 11070876 (+) True G133429
TU151777 other downstream 1222656 11244933 ~ 11255073 (+) True G133497
TU151829 other downstream 1453840 11476117 ~ 11476907 (+) False G133542

Expression Profile