RNA id: TU154199



Basic Information


Item Value
RNA id TU154199
length 296
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G135631
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 14223096 ~ 14223391 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTGCGGTTATCCCTATTGCTTGTACACTTTTTTCTACCACATCTTTTCCTTCCCTTCGCCTGTCTATTAATGTGCTTGGACACAGAGCTCTGTGAACAGCCAGCCTCTTTTGCAATGACCGTTTGTGTCTTGCCCTCCTTGTGCAAGGTGTCAATTGTCATCTTTTGGACAACTGTCAAGTCAGCAGTCTTCCCCATGATTGTGTAGCCTACAGAACTAGACTGAGAGACCATTTAAAGGCCTTTGCAGGTGTTTTGAGTTAATTACATGTTTCACAATATTCTAATTTTCTGAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU154191 lncRNA downstream 73982 14148899 ~ 14149114 (-) True G135623
TU154189 lncRNA downstream 75219 14147638 ~ 14147877 (-) True G135621
TU154015 lncRNA downstream 242805 13980044 ~ 13980291 (-) True G135456
TU154007 lncRNA downstream 256871 13965957 ~ 13966225 (-) True G135448
TU153990 lncRNA downstream 305714 13917116 ~ 13917382 (-) True G135431
TU154200 lncRNA upstream 768 14224159 ~ 14224452 (-) True G135632
TU154201 lncRNA upstream 1953 14225344 ~ 14225561 (-) True G135633
TU154295 lncRNA upstream 77384 14300775 ~ 14301243 (-) True G135725
TU154343 lncRNA upstream 111180 14334571 ~ 14334908 (-) True G135771
TU154459 lncRNA upstream 180506 14403897 ~ 14404114 (-) True G135886
CI01000026_14156809_14170720.mRNA mRNA downstream 52376 14156349 ~ 14170720 (-) True CI01000026_14156809_14170720
CI01000026_13744060_13791879.mRNA mRNA downstream 431217 13744060 ~ 13791879 (-) True CI01000026_13744060_13791879
CI01000026_13299234_13300178.mRNA mRNA downstream 922156 13298482 ~ 13300940 (-) False CI01000026_13299234_13300178
CI01000026_13082079_13210565.mRNA mRNA downstream 1012531 13082079 ~ 13210565 (-) True CI01000026_13082079_13210565
CI01000026_13053390_13065531.mRNA mRNA downstream 1157565 13051213 ~ 13065531 (-) True CI01000026_13053390_13065531
CI01000026_14376741_14381102.mRNA mRNA upstream 153179 14376570 ~ 14382093 (-) True CI01000026_14376741_14381102
CI01000026_14680424_14682203.mRNA mRNA upstream 456968 14680359 ~ 14682203 (-) True CI01000026_14680424_14682203
CI01000026_14684215_14684738.mRNA mRNA upstream 460812 14684203 ~ 14685091 (-) True CI01000026_14684215_14684738
CI01000026_14697383_14715245.mRNA mRNA upstream 473652 14697043 ~ 14715245 (-) True CI01000026_14697383_14715245
CI01000026_14720591_14737569.mRNA mRNA upstream 496425 14719816 ~ 14737569 (-) True CI01000026_14720591_14737569
TU152172 other downstream 2915915 11301915 ~ 11307181 (-) True G133802
TU152150 other downstream 3385491 10834015 ~ 10837605 (-) False G133790
TU152144 other downstream 3432942 10790055 ~ 10790154 (-) True G133789
TU152143 other downstream 3432942 10790055 ~ 10790154 (-) True G133789
TU151953 other downstream 3874139 10348193 ~ 10348957 (-) True CI01000026_10347872_10351783
TU154700 other upstream 331526 14554917 ~ 14555436 (-) True G136110
TU156370 other upstream 2533338 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU156388 other upstream 2582973 16806364 ~ 16808372 (-) True G137667
TU156657 other upstream 2759860 16983251 ~ 16984352 (-) True G137914
TU156715 other upstream 2844957 17068348 ~ 17069433 (-) True G137967

Expression Profile