RNA id: TU156334



Basic Information


Item Value
RNA id TU156334
length 316
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G137628
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 16176137 ~ 16176452 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CATAAAAACTATTAACAATGACTTTTCCCTCAATAAACTCCTAATTTACTGCTTATTAATAGTTAGTAAGGTAGTTGTTAAGTTTAGGTATTGGGTAGGATTAAGAATGTAGAATAAGGTCATGCAGAATAAAGCATTAATATGTGCTTAATAAGTACTAATAAATAGCCAATATTCTATTAATATGCATGCTAATAAGCAACTAGTTAAAAGACCCTAAAATAAAGTGTTACTGAAAAGTTTTGTTGACAGAGATGCACTGTTTAATACTTTTAATTATTTATTTAACAACCATACATAGTATACACATTTAATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156331 lncRNA downstream 4844 16170899 ~ 16171293 (-) True G137625
TU156302 lncRNA downstream 80867 16095015 ~ 16095270 (-) True G137596
TU155911 lncRNA downstream 110590 16065320 ~ 16065547 (-) True G137246
TU155782 lncRNA downstream 284591 15891292 ~ 15891546 (-) True G137130
TU155780 lncRNA downstream 285635 15890278 ~ 15890502 (-) True G137128
TU156343 lncRNA upstream 67424 16243876 ~ 16244076 (-) True G137637
TU156345 lncRNA upstream 70921 16247373 ~ 16247585 (-) True G137639
TU156346 lncRNA upstream 71186 16247638 ~ 16247841 (-) True G137640
TU156395 lncRNA upstream 117162 16293614 ~ 16294668 (-) True G137671
TU156406 lncRNA upstream 161427 16337879 ~ 16346341 (-) True G137682
CI01000026_15930136_15933539.mRNA mRNA downstream 242598 15929803 ~ 15933539 (-) True CI01000026_15930136_15933539
CI01000026_15780006_15782114.mRNA mRNA downstream 393862 15779650 ~ 15782275 (-) True CI01000026_15780006_15782114
CI01000026_15617263_15620665.mRNA mRNA downstream 555190 15616920 ~ 15620947 (-) True CI01000026_15617263_15620665
CI01000026_15604078_15614242.mRNA mRNA downstream 561482 15603964 ~ 15614655 (-) True CI01000026_15604078_15614242
CI01000026_15457228_15461956.mRNA mRNA downstream 714181 15457198 ~ 15461956 (-) True CI01000026_15457228_15461956
CI01000026_16297047_16419596.mRNA mRNA upstream 120190 16296642 ~ 16419739 (-) True CI01000026_16297047_16419596
CI01000026_16432592_16456842.mRNA mRNA upstream 256075 16432527 ~ 16456842 (-) True CI01000026_16432592_16456842
CI01000026_16553812_16554906.mRNA mRNA upstream 376930 16553382 ~ 16555883 (-) True CI01000026_16553812_16554906
CI01000026_16645459_16698069.mRNA mRNA upstream 468812 16645264 ~ 16698069 (-) False CI01000026_16645459_16698069
CI01000026_16739750_16751270.mRNA mRNA upstream 562796 16739248 ~ 16751270 (-) False CI01000026_16739750_16751270
TU154700 other downstream 1620701 14554917 ~ 14555436 (-) True G136110
TU152172 other downstream 4868956 11301915 ~ 11307181 (-) True G133802
TU152150 other downstream 5338532 10834015 ~ 10837605 (-) False G133790
TU152144 other downstream 5385983 10790055 ~ 10790154 (-) True G133789
TU156370 other upstream 580277 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU156388 other upstream 629912 16806364 ~ 16808372 (-) True G137667
TU156657 other upstream 806799 16983251 ~ 16984352 (-) True G137914
TU156715 other upstream 891896 17068348 ~ 17069433 (-) True G137967

Expression Profile