RNA id: TU156343



Basic Information


Item Value
RNA id TU156343
length 201
lncRNA type inter_gene
GC content 0.22
exon number 1
gene id G137637
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 16243876 ~ 16244076 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTTAATTGTCATTAACACTTTAGTGCATTTATATTTATACCATTTTTTTCTCCATAGCAAATATGTAAATAATAATTGATTATATTACAATAGATTAACCTATTCTTTAAATTTATCACTGTACCTATATACACATTACTATATCTATATATTTTGTTGTCCTGTTTTTATTTGTATGTGTGTGTGTATATATGTCATTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156334 lncRNA downstream 67424 16176137 ~ 16176452 (-) True G137628
TU156331 lncRNA downstream 72583 16170899 ~ 16171293 (-) True G137625
TU156302 lncRNA downstream 148606 16095015 ~ 16095270 (-) True G137596
TU155911 lncRNA downstream 178329 16065320 ~ 16065547 (-) True G137246
TU155782 lncRNA downstream 352330 15891292 ~ 15891546 (-) True G137130
TU156345 lncRNA upstream 3297 16247373 ~ 16247585 (-) True G137639
TU156346 lncRNA upstream 3562 16247638 ~ 16247841 (-) True G137640
TU156395 lncRNA upstream 49538 16293614 ~ 16294668 (-) True G137671
TU156406 lncRNA upstream 93803 16337879 ~ 16346341 (-) True G137682
TU156439 lncRNA upstream 354188 16598264 ~ 16598502 (-) True G137715
CI01000026_15930136_15933539.mRNA mRNA downstream 310337 15929803 ~ 15933539 (-) True CI01000026_15930136_15933539
CI01000026_15780006_15782114.mRNA mRNA downstream 461601 15779650 ~ 15782275 (-) True CI01000026_15780006_15782114
CI01000026_15617263_15620665.mRNA mRNA downstream 622929 15616920 ~ 15620947 (-) True CI01000026_15617263_15620665
CI01000026_15604078_15614242.mRNA mRNA downstream 629221 15603964 ~ 15614655 (-) True CI01000026_15604078_15614242
CI01000026_15457228_15461956.mRNA mRNA downstream 781920 15457198 ~ 15461956 (-) True CI01000026_15457228_15461956
CI01000026_16297047_16419596.mRNA mRNA upstream 52566 16296642 ~ 16419739 (-) True CI01000026_16297047_16419596
CI01000026_16432592_16456842.mRNA mRNA upstream 188451 16432527 ~ 16456842 (-) True CI01000026_16432592_16456842
CI01000026_16553812_16554906.mRNA mRNA upstream 309306 16553382 ~ 16555883 (-) True CI01000026_16553812_16554906
CI01000026_16645459_16698069.mRNA mRNA upstream 401188 16645264 ~ 16698069 (-) False CI01000026_16645459_16698069
CI01000026_16739750_16751270.mRNA mRNA upstream 495172 16739248 ~ 16751270 (-) False CI01000026_16739750_16751270
TU154700 other downstream 1688440 14554917 ~ 14555436 (-) True G136110
TU152172 other downstream 4936695 11301915 ~ 11307181 (-) True G133802
TU152150 other downstream 5406271 10834015 ~ 10837605 (-) False G133790
TU152144 other downstream 5453722 10790055 ~ 10790154 (-) True G133789
TU156370 other upstream 512653 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU156388 other upstream 562288 16806364 ~ 16808372 (-) True G137667
TU156657 other upstream 739175 16983251 ~ 16984352 (-) True G137914
TU156715 other upstream 824272 17068348 ~ 17069433 (-) True G137967

Expression Profile