RNA id: TU156500



Basic Information


Item Value
RNA id TU156500
length 204
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G137776
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 16845047 ~ 16845250 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTTGATGACCTGTGCTGTTTTGGATGTCTTGTACATGTTCCGCATGTTCCAAACACCAAGGGGGACTGCAGACTTAGGCTCCAGCAAAGTTCAAGCTTCTTACTTCCCTAGCAGGGCTTTCATCTGAAGCTGTCATAGTGTCACTTGAGTGACTTGAGTCTTCTGTCGGGTCTGATGATGGTATCTGTACTGTTGCTATTGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156392 lncRNA downstream 31543 16811511 ~ 16813504 (-) True G137669
TU156495 lncRNA downstream 52410 16792419 ~ 16792637 (-) True G137771
TU156398 lncRNA downstream 58027 16784325 ~ 16787020 (-) True G137674
TU156402 lncRNA downstream 60800 16783404 ~ 16784247 (-) True G137678
TU156380 lncRNA downstream 83706 16759554 ~ 16761341 (-) True CI01000026_16756776_16760261
TU156505 lncRNA upstream 7075 16852325 ~ 16852683 (-) True G137781
TU156506 lncRNA upstream 9125 16854375 ~ 16854623 (-) True G137782
TU156507 lncRNA upstream 9375 16854625 ~ 16854857 (-) True G137783
TU156514 lncRNA upstream 18851 16864101 ~ 16864324 (-) True G137790
TU156533 lncRNA upstream 44424 16889674 ~ 16890078 (-) True G137806
CI01000026_16817010_16832208.mRNA mRNA downstream 12839 16816295 ~ 16832208 (-) True CI01000026_16817010_16832208
CI01000026_16756776_16760261.mRNA mRNA downstream 84786 16756776 ~ 16760261 (-) False CI01000026_16756776_16760261
CI01000026_16739750_16751270.mRNA mRNA downstream 93777 16739248 ~ 16751270 (-) False CI01000026_16739750_16751270
CI01000026_16645459_16698069.mRNA mRNA downstream 146978 16645264 ~ 16698069 (-) False CI01000026_16645459_16698069
CI01000026_16553812_16554906.mRNA mRNA downstream 289164 16553382 ~ 16555883 (-) True CI01000026_16553812_16554906
CI01000026_16959659_16962519.mRNA mRNA upstream 114023 16959273 ~ 16963221 (-) True CI01000026_16959659_16962519
CI01000026_16988458_16994714.mRNA mRNA upstream 142566 16987816 ~ 16995104 (-) True CI01000026_16988458_16994714
CI01000026_17021405_17034147.mRNA mRNA upstream 175267 17020517 ~ 17034147 (-) True CI01000026_17021405_17034147
TU156388 other downstream 36675 16806364 ~ 16808372 (-) True G137667
TU156370 other downstream 86720 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU154700 other downstream 2289611 14554917 ~ 14555436 (-) True G136110
TU152172 other downstream 5537866 11301915 ~ 11307181 (-) True G133802
TU152150 other downstream 6007442 10834015 ~ 10837605 (-) False G133790
TU156657 other upstream 138001 16983251 ~ 16984352 (-) True G137914
TU156715 other upstream 223098 17068348 ~ 17069433 (-) True G137967

Expression Profile