RNA id: TU156671



Basic Information


Item Value
RNA id TU156671
length 245
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G137928
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 16958051 ~ 16958295 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CCGTTGTTGACATAGTTGTCCTATACTTTAAAGTGTCTTATTCCTCTGCCCTTTTGGGACTTTGGGATATTATTTGTGGAACTTTATATGGCATATGGTTTTATAAAATTAAGATTAAGTCAGCATAAATAGAGAAGATGAAGCTGACATCCTGGTTTGCTACTTCATCTTTTCTGAGATATAATCCTAAACCCTCGATTAGCGAGATAATAAAGACAAAACTGTCATGCTTTCATGAATACATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156670 lncRNA downstream 496 16956866 ~ 16957555 (-) True G137927
TU156550 lncRNA downstream 50338 16907260 ~ 16907713 (-) True G137820
TU156533 lncRNA downstream 67973 16889674 ~ 16890078 (-) True G137806
TU156514 lncRNA downstream 93727 16864101 ~ 16864324 (-) True G137790
TU156507 lncRNA downstream 103194 16854625 ~ 16854857 (-) True G137783
TU156706 lncRNA upstream 89973 17048268 ~ 17048478 (-) True G137958
TU156707 lncRNA upstream 90719 17049014 ~ 17049217 (-) True G137959
TU156710 lncRNA upstream 101574 17059869 ~ 17060072 (-) True G137962
TU156714 lncRNA upstream 108720 17067015 ~ 17067519 (-) True G137966
TU156727 lncRNA upstream 125730 17084025 ~ 17084219 (-) True G137979
CI01000026_16817010_16832208.mRNA mRNA downstream 125843 16816295 ~ 16832208 (-) True CI01000026_16817010_16832208
CI01000026_16756776_16760261.mRNA mRNA downstream 197790 16756776 ~ 16760261 (-) False CI01000026_16756776_16760261
CI01000026_16739750_16751270.mRNA mRNA downstream 206781 16739248 ~ 16751270 (-) False CI01000026_16739750_16751270
CI01000026_16645459_16698069.mRNA mRNA downstream 259982 16645264 ~ 16698069 (-) False CI01000026_16645459_16698069
CI01000026_16553812_16554906.mRNA mRNA downstream 402168 16553382 ~ 16555883 (-) True CI01000026_16553812_16554906
CI01000026_16959659_16962519.mRNA mRNA upstream 978 16959273 ~ 16963221 (-) True CI01000026_16959659_16962519
CI01000026_16988458_16994714.mRNA mRNA upstream 29521 16987816 ~ 16995104 (-) True CI01000026_16988458_16994714
CI01000026_17021405_17034147.mRNA mRNA upstream 62222 17020517 ~ 17034147 (-) True CI01000026_17021405_17034147
TU156388 other downstream 149679 16806364 ~ 16808372 (-) True G137667
TU156370 other downstream 199724 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU154700 other downstream 2402615 14554917 ~ 14555436 (-) True G136110
TU152172 other downstream 5650870 11301915 ~ 11307181 (-) True G133802
TU152150 other downstream 6120446 10834015 ~ 10837605 (-) False G133790
TU156657 other upstream 24956 16983251 ~ 16984352 (-) True G137914
TU156715 other upstream 110053 17068348 ~ 17069433 (-) True G137967

Expression Profile