RNA id: TU156742


Basic Information

Item Value
RNA id TU156742
length 356
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G137994
representative True

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 17105200 ~ 17105555 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAACACTCTAAAAAATAAGTCTTCCAGATGTACACTGCCCTCCAAAAGTTTGGAAACGCCCTAGAAAAGTGGGGTTTTGGACAATATTGGCATGAATCCTTTTTAATTTGTGATAATTTTGCACTGATAAGGGACAACACAAACTACGAAAACATATTTTATTACATAAACAGTTTATACATAGAAAAAACTTAAATTTTCGATTCATCAAAATATCCACCATTAGCAGCTATCTGACCTAAACTGGGTTCTAATTGGTTCATTCCATTCTAAACTTAGTTGGCAATCAATTGTTGAAGATATTAAGGTGTGCTGACCCAAAAATCTTTTACAAACCTGGGCCAAGTTTAAACCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156727 lncRNA downstream 20981 17084025 ~ 17084219 (-) True G137979
TU156714 lncRNA downstream 37681 17067015 ~ 17067519 (-) True G137966
TU156710 lncRNA downstream 45128 17059869 ~ 17060072 (-) True G137962
TU156707 lncRNA downstream 55983 17049014 ~ 17049217 (-) True G137959
TU156706 lncRNA downstream 56722 17048268 ~ 17048478 (-) True G137958
TU156765 lncRNA upstream 40927 17146482 ~ 17147927 (-) True G138017
CI01000026_17021405_17034147.mRNA mRNA downstream 71053 17020517 ~ 17034147 (-) True CI01000026_17021405_17034147
CI01000026_16988458_16994714.mRNA mRNA downstream 110096 16987816 ~ 16995104 (-) True CI01000026_16988458_16994714
CI01000026_16959659_16962519.mRNA mRNA downstream 141979 16959273 ~ 16963221 (-) True CI01000026_16959659_16962519
CI01000026_16817010_16832208.mRNA mRNA downstream 272992 16816295 ~ 16832208 (-) True CI01000026_16817010_16832208
CI01000026_16756776_16760261.mRNA mRNA downstream 344939 16756776 ~ 16760261 (-) False CI01000026_16756776_16760261
TU156715 other downstream 35767 17068348 ~ 17069433 (-) True G137967
TU156657 other downstream 120848 16983251 ~ 16984352 (-) True G137914
TU156388 other downstream 296828 16806364 ~ 16808372 (-) True G137667
TU156370 other downstream 346873 16756729 ~ 16758327 (-) False CI01000026_16756776_16760261
TU154700 other downstream 2549764 14554917 ~ 14555436 (-) True G136110

Expression Profile