RNA id: CI01000027_06327905_06328111.mRNA



Basic Information


Item Value
RNA id CI01000027_06327905_06328111.mRNA
length 316
RNA type mRNA
GC content 0.35
exon number 1
gene id CI01000027_06327905_06328111
representative True

Chromosome Information


Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6327905 ~ 6328220 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGTTGTCAACAACACAAAGCCTAATAACCGTGAGCATGCTAACGGGCTCTCTGCTGGTCTTTTGATAGTATTGCAATCCTACATATCAGGGGTTTTAAAACTTGTAATGCTTAGGACCTCCAAATATGACGATGATCTCCTAGCTATGATGTGTCAAAACAATGGCAAGCTTAATATAGGCATAAGGACAAATGGAGTGATTTAACAGACTAAAATAAACAAATTAATATATAATGAAATTATTACATTTTCGTTTTTCATTTCAAGGCGTATATGTCGTAGGCCTATTTCAGGCCACTTTTCATGTTACATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160277 lncRNA upstream 2561 6322828 ~ 6325344 (+) True G141038
TU160271 lncRNA upstream 25121 6301000 ~ 6302784 (+) False G141032
TU160270 lncRNA upstream 25121 6301027 ~ 6302784 (+) True G141032
TU160283 lncRNA upstream 27322 6300314 ~ 6300583 (+) True G141044
TU160276 lncRNA upstream 28147 6299330 ~ 6299758 (+) True G141037
TU160361 lncRNA downstream 22879 6351099 ~ 6354786 (+) True G141117
TU160337 lncRNA downstream 80329 6408549 ~ 6408804 (+) True G141093
TU160324 lncRNA downstream 80718 6408938 ~ 6409292 (+) True G141080
TU160358 lncRNA downstream 109705 6437925 ~ 6440544 (+) True G141114
TU160357 lncRNA downstream 116074 6444294 ~ 6445548 (+) True G141113
CI01000027_06108585_06112721.mRNA mRNA upstream 215150 6108585 ~ 6112755 (+) True CI01000027_06108585_06112721
CI01000027_06103946_06107995.mRNA mRNA upstream 219910 6103889 ~ 6107995 (+) True CI01000027_06103946_06107995
CI01000027_06042239_06051165.mRNA mRNA upstream 276286 6040913 ~ 6051619 (+) True CI01000027_06042239_06051165
CI01000027_05994575_05998236.mRNA mRNA upstream 329552 5994575 ~ 5998353 (+) True CI01000027_05994575_05998236
CI01000027_05981521_05983935.mRNA mRNA upstream 343202 5981356 ~ 5984703 (+) True CI01000027_05981521_05983935
CI01000027_06329025_06333271.mRNA mRNA downstream 499 6328719 ~ 6333336 (+) True CI01000027_06329025_06333271
CI01000027_06335278_06348176.mRNA mRNA downstream 6940 6335160 ~ 6348853 (+) True CI01000027_06335278_06348176
CI01000027_06392269_06407773.mRNA mRNA downstream 63538 6391758 ~ 6407840 (+) True CI01000027_06392269_06407773
CI01000027_06410011_06426230.mRNA mRNA downstream 81791 6410011 ~ 6426936 (+) True CI01000027_06410011_06426230
CI01000027_06458587_06470747.mRNA mRNA downstream 130367 6458587 ~ 6470747 (+) True CI01000027_06458587_06470747
TU160291 other upstream 56305 6271367 ~ 6271600 (+) True G141052
TU160143 other upstream 362579 5963206 ~ 5965326 (+) True G140924
TU160140 other upstream 569035 5757776 ~ 5757799 (+) True G140921
TU160081 other upstream 607140 5712612 ~ 5712702 (+) True G140862
TU159891 other upstream 1254769 5072377 ~ 5072419 (+) True G140681
TU160305 other downstream 378157 6707174 ~ 6710632 (+) True G141061
TU160326 other downstream 570191 6898411 ~ 6900923 (+) True G141082
TU160307 other downstream 624726 6952946 ~ 6957767 (+) True CI01000027_06951132_06956691
TU160585 other downstream 1140524 7468744 ~ 7468892 (+) True G141315
TU161924 other downstream 1622483 7950703 ~ 7951942 (+) True CI01000027_07947743_07951397

Expression Profile