RNA id: TU157051


Basic Information

Item Value
RNA id TU157051
length 328
RNA type TUCP
GC content 0.53
exon number 2
gene id G138238
representative True

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 829774 ~ 831683 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATAACAGTTTGCATGCAATGACAACACTCATAAATCAACAGTCCTGTGTGAATTTAATCTGTTACCAGGGCAGGGTAAGGTGCAGGTCTCCTCCAGAACAATCTTCTTATCTCCGTCGACGGCCTGCTCCAATCCAGCACAGAGATCTTCCTCTACAATGCTGCTCTTCCCATCACTGGAGCCGTCTGATACAAAGCACGACAGGTTCCGGAAACGCAGGCCCACCCCGCACACCACCTCCTCAACACGGCACTCTGACCACGGGCCGTACTGCCATCTGTAGCAGGGTCGCACAGGACACGGTTTCCACTGCTCCATCTGAGACGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157039 lncRNA upstream 8505 815994 ~ 821269 (+) True G138234
TU157038 lncRNA upstream 14968 814581 ~ 814806 (+) True G138233
TU157034 lncRNA upstream 19833 809657 ~ 809941 (+) True G138229
TU156993 lncRNA upstream 86922 650189 ~ 742852 (+) False G138200
TU156994 lncRNA upstream 86922 699852 ~ 742852 (+) True G138200
TU157064 lncRNA downstream 27659 859342 ~ 883513 (+) False G138247
TU157066 lncRNA downstream 44686 876369 ~ 893121 (+) True G138247
TU157091 lncRNA downstream 102060 933743 ~ 934498 (+) True G138267
TU157101 lncRNA downstream 137258 968941 ~ 969167 (+) True G138277
TU157127 lncRNA downstream 152774 984457 ~ 984699 (+) True G138300
CI01000027_00779517_00795032.mRNA mRNA upstream 34385 778954 ~ 795389 (+) True CI01000027_00779517_00795032
CI01000027_00765527_00776450.mRNA mRNA upstream 53011 765467 ~ 776763 (+) True CI01000027_00765527_00776450
CI01000027_00738809_00739296.mRNA mRNA upstream 89380 738004 ~ 740394 (+) True CI01000027_00738809_00739296
CI01000027_00681087_00701456.mRNA mRNA upstream 128227 681087 ~ 701547 (+) False CI01000027_00681087_00701456
CI01000027_00637372_00642483.mRNA mRNA upstream 187132 637372 ~ 642642 (+) True CI01000027_00637372_00642483
CI01000027_00909268_00918831.mRNA mRNA downstream 76830 908513 ~ 919213 (+) True CI01000027_00909268_00918831
CI01000027_00949578_00953698.mRNA mRNA downstream 117038 948721 ~ 954281 (+) True CI01000027_00949578_00953698
CI01000027_00980123_00987611.mRNA mRNA downstream 147472 979155 ~ 987884 (+) True CI01000027_00980123_00987611
CI01000027_01033975_01037549.mRNA mRNA downstream 201220 1032903 ~ 1037922 (+) True CI01000027_01033975_01037549
CI01000027_01045587_01050470.mRNA mRNA downstream 211709 1043392 ~ 1050863 (+) True CI01000027_01045587_01050470
TU156938 other upstream 401098 418294 ~ 428676 (+) True CI01000027_00391159_00499309
TU156795 other upstream 729517 39146 ~ 100257 (+) True G138030
TU157065 other downstream 23705 855388 ~ 869575 (+) False G138247
TU157117 other downstream 164287 995970 ~ 999181 (+) True G138290
TU157281 other downstream 675278 1506961 ~ 1507816 (+) True G138436
TU157376 other downstream 832725 1664408 ~ 1676860 (+) False G138515
TU157841 other downstream 2652704 3484387 ~ 3486647 (+) True G138915

Expression Profile