RNA id: TU159683


Basic Information

Item Value
RNA id TU159683
length 203
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G140482
representative True

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4321390 ~ 4321592 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAAAAAGAAGCTGCGCAAGCCACAGGTCTAGCCATCCGTACCACAAAGCACACAGCCAGTGCATCGACCGTTCAATGGTTGCTATAGTTGCCATGGAGAGACATCTGTGTAAAATCTCTCTCCTTAATGCTCTGATCTCACACTCTGGCTTTTTCGGTCTGCTGGTGAGGCGGTCGTAGAGAAGTTACAGAGCCGGGGTCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159591 lncRNA upstream 110959 4210199 ~ 4210431 (+) True G140408
TU159576 lncRNA upstream 146045 4174904 ~ 4175345 (+) True G140394
TU159574 lncRNA upstream 146729 4170063 ~ 4174661 (+) True G140392
TU159573 lncRNA upstream 152755 4168409 ~ 4168635 (+) True G140391
TU159568 lncRNA upstream 174596 4146488 ~ 4146794 (+) True G140386
TU159690 lncRNA downstream 40457 4362049 ~ 4362257 (+) True G140489
TU159692 lncRNA downstream 79897 4401489 ~ 4403088 (+) True G140490
TU159648 lncRNA downstream 82734 4404326 ~ 4413069 (+) True G140447
TU159697 lncRNA downstream 92762 4414354 ~ 4414576 (+) True G140495
TU159666 lncRNA downstream 106445 4428037 ~ 4430693 (+) True G140465
CI01000027_04213570_04229519.mRNA mRNA upstream 91713 4212498 ~ 4229677 (+) True CI01000027_04213570_04229519
CI01000027_04054186_04103227.mRNA mRNA upstream 216970 4053038 ~ 4104420 (+) True CI01000027_04054186_04103227
CI01000027_04015806_04037491.mRNA mRNA upstream 282616 4015730 ~ 4038774 (+) True CI01000027_04015806_04037491
CI01000027_04012798_04014351.mRNA mRNA upstream 307039 4012747 ~ 4014351 (+) True CI01000027_04012798_04014351
CI01000027_03998691_04000730.mRNA mRNA upstream 320556 3998168 ~ 4000834 (+) True CI01000027_03998691_04000730
CI01000027_04350540_04357555.mRNA mRNA downstream 28422 4350014 ~ 4358099 (+) True CI01000027_04350540_04357555
CI01000027_04381523_04393547.mRNA mRNA downstream 59931 4381523 ~ 4394114 (+) True CI01000027_04381523_04393547
CI01000027_04470309_04483532.mRNA mRNA downstream 148553 4470145 ~ 4483559 (+) True CI01000027_04470309_04483532
CI01000027_04485614_04488056.mRNA mRNA downstream 162299 4483891 ~ 4488056 (+) True CI01000027_04485614_04488056
CI01000027_04488278_04495470.mRNA mRNA downstream 166686 4488278 ~ 4496077 (+) True CI01000027_04488278_04495470
TU157886 other upstream 801325 3502072 ~ 3520065 (+) True G138953
TU157841 other upstream 834743 3484387 ~ 3486647 (+) True G138915
TU157376 other upstream 2644530 1664408 ~ 1676860 (+) False G138515
TU157281 other upstream 2813574 1506961 ~ 1507816 (+) True G138436
TU157117 other upstream 3322209 995970 ~ 999181 (+) True G138290
TU159628 other downstream 415806 4737398 ~ 4774262 (+) False G140436
TU159629 other downstream 415806 4737398 ~ 4774262 (+) False G140436
TU159630 other downstream 415806 4737398 ~ 4774262 (+) True G140436
TU159637 other downstream 458825 4780417 ~ 4784404 (+) False G140440
TU159638 other downstream 458825 4780417 ~ 4784404 (+) False G140440

Expression Profile