RNA id: TU163120



Basic Information


Item Value
RNA id TU163120
length 233
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G143585
representative True

Chromosome Information


Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8507732 ~ 8507964 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TCGCAGACTTGCGGGCTCAGCTGAAGTGCGCATCCAGGGCGCATAGGGGCCGCAAAGGGGGCGCTCGCGAGCACCCTTCTGAAACCTAAAATGATGAATGGGACAACCTACGGTCTCGTAGACTTAACGGACAAACGCACGCAGCAGCCATTGTAAGTCCACAAGACCGAAAGTGCATACTAGTGTGCCATTTGGGATTCAGTAGTGTGACCAGCATAAACGTTCTTTTCTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163105 lncRNA downstream 65367 8441509 ~ 8442365 (-) True G143570
TU163091 lncRNA downstream 116071 8391458 ~ 8391661 (-) True G143560
TU162990 lncRNA downstream 119623 8385961 ~ 8388109 (-) True G143459
TU163000 lncRNA downstream 136273 8363672 ~ 8371459 (-) True G143469
TU163088 lncRNA downstream 148630 8358822 ~ 8359102 (-) True G143557
TU162994 lncRNA upstream 20681 8528645 ~ 8533178 (-) True G143463
TU163010 lncRNA upstream 70464 8578428 ~ 8590320 (-) True G143479
TU163132 lncRNA upstream 147216 8655180 ~ 8655488 (-) True G143597
TU163133 lncRNA upstream 149345 8657309 ~ 8657680 (-) True G143598
TU163136 lncRNA upstream 152096 8660060 ~ 8660513 (-) True G143601
CI01000027_08483034_08503082.mRNA mRNA downstream 4650 8482939 ~ 8503082 (-) True CI01000027_08483034_08503082
CI01000027_08443968_08446252.mRNA mRNA downstream 61296 8443177 ~ 8446436 (-) True CI01000027_08443968_08446252
CI01000027_08429132_08434558.mRNA mRNA downstream 71474 8428312 ~ 8436258 (-) True CI01000027_08429132_08434558
CI01000027_08422679_08426771.mRNA mRNA downstream 80961 8422679 ~ 8426771 (-) True CI01000027_08422679_08426771
CI01000027_08285855_08291534.mRNA mRNA downstream 214909 8285769 ~ 8292823 (-) True CI01000027_08285855_08291534
CI01000027_08514843_08515829.mRNA mRNA upstream 6524 8514488 ~ 8518341 (-) True CI01000027_08514843_08515829
CI01000027_08537911_08550747.mRNA mRNA upstream 28863 8536827 ~ 8551458 (-) True CI01000027_08537911_08550747
CI01000027_08568349_08570750.mRNA mRNA upstream 60021 8567985 ~ 8570750 (-) True CI01000027_08568349_08570750
CI01000027_08595524_08646502.mRNA mRNA upstream 86974 8594938 ~ 8646502 (-) True CI01000027_08595524_08646502
CI01000027_08671118_08685781.mRNA mRNA upstream 163131 8671095 ~ 8685781 (-) True CI01000027_08671118_08685781
TU162851 other downstream 621683 7884535 ~ 7886049 (-) True G143325
TU162783 other downstream 833963 7669329 ~ 7673769 (-) True G143267
TU161694 other downstream 1067541 7439178 ~ 7440191 (-) True G142299
TU161593 other downstream 1349734 7153637 ~ 7157998 (-) True G142209
TU161596 other downstream 1349919 7153623 ~ 7157813 (-) False G142209
TU163997 other upstream 2030816 10538780 ~ 10542148 (-) True G144365

Expression Profile