RNA id: CI01000028_09331581_09331760.mRNA


Basic Information

Item Value
RNA id CI01000028_09331581_09331760.mRNA
length 422
RNA type mRNA
GC content 0.50
exon number 1
gene id CI01000028_09331581_09331760
representative False

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 9331339 ~ 9331886 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGCAATGGTGGACCTGGGCCGTGGAGCAGAAGGTCCTGGTGCACTGGCGGACCTGGGCCATGGAGCAGAGGGTCCTGGTACACTGGGGGACCTGGGCCGTGGAGCAGAGGGTCCTGTACACTGGGGGACCTAGGCCGTGGAGCAGAGGGTCCTGGTGCAGTGGTGGACCTAGGCCTTGAAGCAGTGGTGGACCAAGCTCCTCAGCCAGGTATGTCACATAACCTGCTTTCTGGAATACCCCCCTGACAAGGGGAGCACATGGCAGGATAACATGACTGGAACATGACAAACAAGGGAAACACATGGCAAACTAGGAACTTAACAATGAGACATGACTAAACTTCAAAATAAAACATGAAACAAAACCAAAACTAGACATGACACATCTCAAAATTGTTTTTCATATAATGTTCATAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU171410 lncRNA downstream 16681 9313848 ~ 9314658 (-) True G150943
TU171405 lncRNA downstream 23498 9307501 ~ 9307841 (-) True G150938
TU171404 lncRNA downstream 26785 9304329 ~ 9304554 (-) True G150937
TU171392 lncRNA downstream 40748 9288983 ~ 9290591 (-) False G150926
TU171422 lncRNA upstream 2007 9333767 ~ 9333977 (-) True G150953
TU171612 lncRNA upstream 19313 9351073 ~ 9351358 (-) True G151087
TU171614 lncRNA upstream 21165 9352925 ~ 9353374 (-) True G151089
TU171615 lncRNA upstream 22140 9353900 ~ 9354181 (-) True G151090
TU171619 lncRNA upstream 37345 9369105 ~ 9369504 (-) True G151094
CI01000028_09326092_09330464.mRNA mRNA downstream 832 9325847 ~ 9330507 (-) True CI01000028_09326092_09330464
CI01000028_09224491_09231508.mRNA mRNA downstream 99494 9223805 ~ 9231845 (-) True CI01000028_09224491_09231508
CI01000028_09159785_09161996.mRNA mRNA downstream 168523 9159749 ~ 9162816 (-) True CI01000028_09159785_09161996
CI01000028_09097962_09100854.mRNA mRNA downstream 230485 9097962 ~ 9100854 (-) True CI01000028_09097962_09100854
CI01000028_09035121_09057360.mRNA mRNA downstream 273374 9034579 ~ 9057965 (-) True CI01000028_09035121_09057360
CI01000028_09340262_09347554.mRNA mRNA upstream 8189 9339949 ~ 9347720 (-) True CI01000028_09340262_09347554
CI01000028_09449656_09453949.mRNA mRNA upstream 117343 9449103 ~ 9453949 (-) True CI01000028_09449656_09453949
CI01000028_09463027_09468717.mRNA mRNA upstream 130614 9462374 ~ 9468717 (-) True CI01000028_09463027_09468717
CI01000028_09469357_09494746.mRNA mRNA upstream 137583 9469343 ~ 9494746 (-) False CI01000028_09469357_09494746
CI01000028_09620918_09652565.mRNA mRNA upstream 288066 9619826 ~ 9652660 (-) True CI01000028_09620918_09652565
TU170727 other downstream 637596 8693398 ~ 8693743 (-) True G150328
TU170278 other downstream 1307095 8011796 ~ 8024244 (-) False G149923
TU170277 other downstream 1318632 7974568 ~ 8012707 (-) False G149923
TU169985 other downstream 1795596 7525962 ~ 7535743 (-) False CI01000028_07527725_07535631
TU171580 other upstream 145085 9476845 ~ 9487121 (-) True CI01000028_09469357_09494746

Expression Profile