RNA id: TU176707



Basic Information


Item Value
RNA id TU176707
length 698
RNA type TUCP
GC content 0.58
exon number 1
gene id G155627
representative True

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7931480 ~ 7932177 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAGTGAGTCTGACAAAGTGTGAAGACACCGCCCACACTCCCTCCACTGAGGGTGAGCTGCTGCTGGCCTCTGCATTGTTTTATGAATTGGAAATCAGAGTCTCCTATGTTCCTGCTGGTTCCGCCCAGCTCGAGTTCTTCTGTGTTCCCGTTGGTTCCGCCCAGCTCAGATTCTCCTGTGTTTCCGCTTGTTCTGCCCATCTCAAGTTCTCCTGTGTCCCCGCTGGTTCCACCCAGCTCAGAGTCTCCTATGCCCCCACTGGTTCACCCAGCTCGAAGTCTCCTGTGTCTCCAGAGTTCCGACAGTGTCTCCCTCTCCCACCTCCTCTTCCAAAATCAGCCAGTCCGTCAGCCCCGCCTCTGCTGATTCCCTTCAGCCCCTCGGCTTCTCCTCTGAAGCCACTCTACGGTGGATTTACCTCTGGTCTTCCGCTCTCCAGCTCTGCCTAGTAAAGAGGATTCCCTTTCTCTGCCTCCAGCCACTGATCCTATCACTCCACTTCGGCCCATCCACCTGTCAGCTCCGCCTTGCCTCCTCCCTCGGCTCCATCAGAGACCATCATCCTTATGGCTCCACCGGGTATCCTCGTCCCTCTGGCTCCACCTTGGTCAGCTCCACCGAGCTGTCCTCTGCACTGTCTCTCCACCCCTTCAGCTCTGTCTGGCTCCGCCTTTCCCTCCGGCTCCACCTCGGTGCTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU176700 lncRNA upstream 96016 7835244 ~ 7835464 (+) True G155620
TU176699 lncRNA upstream 96288 7834982 ~ 7835192 (+) True G155619
TU176695 lncRNA upstream 99389 7831634 ~ 7832091 (+) True G155615
TU176693 lncRNA upstream 113130 7818140 ~ 7818350 (+) True G155613
TU176691 lncRNA upstream 114416 7816838 ~ 7817064 (+) True G155611
TU176710 lncRNA downstream 1206 7933383 ~ 7936529 (+) True CI01000029_07933165_07944093
TU176724 lncRNA downstream 4452 7936629 ~ 7936921 (+) True G155644
TU176725 lncRNA downstream 7370 7939547 ~ 7940799 (+) True G155645
TU176726 lncRNA downstream 8710 7940887 ~ 7941365 (+) True G155646
TU176727 lncRNA downstream 9467 7941644 ~ 7941849 (+) True G155647
CI01000029_07922221_07926151.mRNA mRNA upstream 3944 7922221 ~ 7927536 (+) True CI01000029_07922221_07926151
CI01000029_07885342_07908699.mRNA mRNA upstream 21688 7884282 ~ 7909792 (+) True CI01000029_07885342_07908699
CI01000029_07672445_07687240.mRNA mRNA upstream 243607 7672445 ~ 7687873 (+) True CI01000029_07672445_07687240
CI01000029_07653640_07663101.mRNA mRNA upstream 268379 7653334 ~ 7663101 (+) True CI01000029_07653640_07663101
CI01000029_07643406_07651059.mRNA mRNA upstream 280099 7643406 ~ 7651381 (+) True CI01000029_07643406_07651059
CI01000029_07933165_07944093.mRNA mRNA downstream 988 7933165 ~ 7944093 (+) False CI01000029_07933165_07944093
CI01000029_07997857_08002279.mRNA mRNA downstream 65519 7997696 ~ 8003097 (+) True CI01000029_07997857_08002279
CI01000029_08007965_08016092.mRNA mRNA downstream 74878 8007055 ~ 8016149 (+) True CI01000029_08007965_08016092
CI01000029_08019292_08036434.mRNA mRNA downstream 87115 8019292 ~ 8036758 (+) True CI01000029_08019292_08036434
CI01000029_08053844_08058278.mRNA mRNA downstream 121667 8053844 ~ 8058521 (+) True CI01000029_08053844_08058278
TU176602 other upstream 293646 7634833 ~ 7637834 (+) True G155522
TU176307 other upstream 1024048 6906188 ~ 6907432 (+) False CI01000029_06906861_06907157
TU176095 other upstream 1441186 6431535 ~ 6490294 (+) False G155083
TU176099 other upstream 1441186 6431535 ~ 6490294 (+) True G155083
TU176089 other upstream 1643082 6282685 ~ 6288398 (+) True G155079
TU177125 other downstream 1032641 8964818 ~ 9064541 (+) False G156007

Expression Profile