RNA id: TU176977



Basic Information


Item Value
RNA id TU176977
length 200
lncRNA type read_through
GC content 0.31
exon number 3
gene id G155868
representative True

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8605257 ~ 8702576 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGATTTGCTTCTCAAGAAACATTTCTGATTATTATCAATGTTGAAAACAGTCATATTTTTGTGGAAACTGTGATACATTTTATTTTTCAGGATTCTTTGATGAATAGAAAGTTCAAAAGAACAGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU176976 lncRNA upstream 199 8604832 ~ 8605058 (+) True G155867
TU176975 lncRNA upstream 2215 8602812 ~ 8603042 (+) True G155866
TU176969 lncRNA upstream 7553 8596234 ~ 8597704 (+) True G155860
TU176962 lncRNA upstream 10116 8594562 ~ 8595141 (+) True G155853
TU176964 lncRNA upstream 11301 8593547 ~ 8593956 (+) True G155855
TU177040 lncRNA downstream 14978 8717554 ~ 8717870 (+) True G155930
TU177041 lncRNA downstream 16224 8718800 ~ 8719027 (+) True G155931
TU176855 lncRNA downstream 25087 8727663 ~ 8729423 (+) True G155765
TU176856 lncRNA downstream 29277 8731853 ~ 8736093 (+) True G155766
TU177044 lncRNA downstream 37445 8740021 ~ 8740233 (+) True G155934
CI01000029_08578097_08583564.mRNA mRNA upstream 21284 8577815 ~ 8583973 (+) True CI01000029_08578097_08583564
CI01000029_08558693_08564749.mRNA mRNA upstream 40261 8558263 ~ 8564996 (+) True CI01000029_08558693_08564749
CI01000029_08533907_08555317.mRNA mRNA upstream 49288 8533907 ~ 8555969 (+) True CI01000029_08533907_08555317
CI01000029_08506379_08516187.mRNA mRNA upstream 88952 8506379 ~ 8516305 (+) True CI01000029_08506379_08516187
CI01000029_08484998_08502958.mRNA mRNA upstream 102088 8484952 ~ 8503169 (+) True CI01000029_08484998_08502958
CI01000029_08743604_08749941.mRNA mRNA downstream 38158 8740734 ~ 8750337 (+) True CI01000029_08743604_08749941
CI01000029_08759743_08761002.mRNA mRNA downstream 57167 8759743 ~ 8761194 (+) False CI01000029_08759743_08761002
CI01000029_08915550_08920146.mRNA mRNA downstream 211847 8914423 ~ 8920358 (+) True CI01000029_08915550_08920146
CI01000029_08990637_09003719.mRNA mRNA downstream 287981 8990557 ~ 9003779 (+) True CI01000029_08990637_09003719
CI01000029_09058596_09061088.mRNA mRNA downstream 356020 9058596 ~ 9061323 (+) True CI01000029_09058596_09061088
TU176707 other upstream 673080 7931480 ~ 7932177 (+) True G155627
TU176602 other upstream 967423 7634833 ~ 7637834 (+) True G155522
TU176307 other upstream 1697825 6906188 ~ 6907432 (+) False CI01000029_06906861_06907157
TU176095 other upstream 2114963 6431535 ~ 6490294 (+) False G155083
TU177125 other downstream 262242 8964818 ~ 9064541 (+) False G156007

Expression Profile