RNA id: CI01000030_08837486_08838040.mRNA



Basic Information


Item Value
RNA id CI01000030_08837486_08838040.mRNA
length 1231
RNA type mRNA
GC content 0.42
exon number 1
gene id CI01000030_08837486_08838040
representative True

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8837221 ~ 8838451 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGATAAAAAGCAAGCTGCGATGAGCACTAAGATCCTCGAACAATCTGCCGACCATGACTATGATATATAGGTTAACACAATTAGTAAAAGAAAAGACTCTACGCCAACAACTCCGAGCAAGATTCCAGCTGGGAAAAAGAGCAAGACTACATTAAAGGAAAACAAGGTGTCTAACCTGACCATACTGGAAGCCATTCAGAGTTTGGAGAAGAACTTTAATGAGCAACTGACGCAACTTCGAGAGCAAGCTAAGCAGAGTAGCAGCATGATTGCTAGCCTATCGAAAGCCGTGCAGTTCAGTGCCGAAGAAGTTAAGGAATGCAAGGGGAAAGTCATCGAGCTAGAAAAGTGCAATGATCGTCTGTGCAAAGAAAATCAAGAGCTTAAAGAAAGAATCAGGGACCAGGAGAGATATAAGATGCAATGGTGTCTGAAACTGAAAGGTTTATCAGAAAGAAAGGACGAAAACGTAAGAACAGACGTCATACAACTGTTCAAGGAGATCGCCCCTGACATGGAACAGCGACAACTCGAAGAAGCAATTGATATTGCGCACAGAGTCGGACGAAAAGAAGACAACAGGAATAGACACGTAGTTGTGTTATTTGTCCGGAAACTTGTCAAGCAGGAGTTATGGCGTCACTGCAAGGATTCCCCGGTGTGCAGAGAGAAAGGTGTCCGCCTCACCGAGATGGCCCCGCTAGAGGATAGAGAGGCAAGGAAAAAACTGTGGCCGCAGATTGAACAGGCTCGTCGGGAGGGAAAGCGTGCCTACTACCGCGGACTGCACGGATACATAGAGGGTCGTCGAATTGGTTAAACGAAGGAAAGGTTTGATCTACTGACATTAGAGGTTGAAGGAATGTGTTAAGAGGACATGGGACTATTGTTGTATTTGCTAATCAGCGTAAATAGGCTTTGAACTAAGTTCTTAATATGTTTTTTTTTTTCTTTAGTTTCTTCATTTAAAATATCTCTGTTCAGCAATGTTCAATTGTTCAGTCTCAATTGCTTCATAAAACGTGAGGGGTCTAAAAGATTTAGTCAAAAGAAAAGCATTATGTTTATTTTATTAAGTCTGCTGGTGTTGCAGTTTGTTTTAATAGGTTTCCAGGTGATATAATCTCATACAGGACAGATAACCAAGGTCATTGGCTGATGGTGGTTTTAAAAATTGATGGTTGTTTTTTCATACTAACTAATGTGTATGGTCATAGAACTGTTGCCCAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU184244 lncRNA upstream 25766 8809324 ~ 8811455 (+) True G162236
TU184240 lncRNA upstream 30044 8806668 ~ 8807177 (+) True G162233
TU184239 lncRNA upstream 31263 8805494 ~ 8805958 (+) True G162232
TU184185 lncRNA upstream 33429 8801247 ~ 8803792 (+) True G162192
TU184237 lncRNA upstream 36656 8800276 ~ 8800565 (+) True G162230
TU184169 lncRNA downstream 26724 8865175 ~ 8930522 (+) False G162186
TU184171 lncRNA downstream 26724 8865175 ~ 8927009 (+) False G162186
TU184174 lncRNA downstream 26724 8865175 ~ 8930522 (+) False G162186
TU184175 lncRNA downstream 26724 8865175 ~ 8927009 (+) False G162186
TU184170 lncRNA downstream 83239 8921690 ~ 8927009 (+) False G162186
CI01000030_08763819_08775586.mRNA mRNA upstream 61449 8763730 ~ 8775772 (+) True CI01000030_08763819_08775586
CI01000030_08555726_08559327.mRNA mRNA upstream 277824 8555379 ~ 8559397 (+) False CI01000030_08555726_08559327
CI01000030_08168074_08174577.mRNA mRNA upstream 662559 8167927 ~ 8174662 (+) False CI01000030_08168074_08174577
CI01000030_08159242_08166884.mRNA mRNA upstream 670276 8159242 ~ 8166945 (+) True CI01000030_08159242_08166884
CI01000030_08155452_08158318.mRNA mRNA upstream 678512 8155452 ~ 8158709 (+) False CI01000030_08155452_08158318
CI01000030_08845484_08861801.mRNA mRNA downstream 7033 8845484 ~ 8861801 (+) True CI01000030_08845484_08861801
CI01000030_08862264_08875155.mRNA mRNA downstream 23813 8862264 ~ 8875155 (+) True CI01000030_08862264_08875155
CI01000030_08875265_08877569.mRNA mRNA downstream 36814 8875265 ~ 8877569 (+) True CI01000030_08875265_08877569
CI01000030_08889890_08899808.mRNA mRNA downstream 51439 8889890 ~ 8900680 (+) True CI01000030_08889890_08899808
CI01000030_08906500_08914084.mRNA mRNA downstream 68049 8906500 ~ 8914084 (+) True CI01000030_08906500_08914084
TU184111 other upstream 265495 8568010 ~ 8571726 (+) True G162137
TU183922 other upstream 288896 8544582 ~ 8548325 (+) True G161986
TU184054 other upstream 597617 8237965 ~ 8239604 (+) True G162088
TU183810 other upstream 964449 7854085 ~ 7859348 (+) True G161901
TU183621 other upstream 1634736 7199935 ~ 7200017 (+) True G161721
TU184486 other downstream 517952 9356403 ~ 9357014 (+) False G162449
TU184485 other downstream 518108 9356559 ~ 9357014 (+) False G162449
TU184353 other downstream 1204342 10042793 ~ 10042887 (+) True G162323
TU184321 other downstream 1294848 10133299 ~ 10133763 (+) True G162297
TU184320 other downstream 1308813 10221095 ~ 10221224 (+) True G162297

Expression Profile