RNA id: TU178343


Basic Information

Item Value
RNA id TU178343
length 1115
RNA type TUCP
GC content 0.45
exon number 5
gene id G157076
representative False

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 12878 ~ 17756 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCTTGCAGTTTAGCTTTATTTTTCACAACCCAACACAATTACATATTTCAGAAATTCAACACCATCAAAAGACAAAAACATAACCTCATCATACCACTATTCATCTACAGACATATAAACTTAAATTATGTGTACAAGCCTCATCTTTAGCATCCATAAAGCTTGTTGATCCTCAGGATGTCGATGTTGGACAGTCCCTGCCTCTGTCCAATTTCCACTGTCGCATCAGGAATGGGAGTGATTGTTTCCAGCCCGGGCTGGGTGGAGAAGGCCGTTTTTCCATAGTGCATGATGGAGCCGTAGTCGTATGGAGTGTTTTGGTTGTTGGTGTTCTGTTTCTGGAAGTTGTAGGCCATATCAGGAGAGATGTTCTCCCAGTTGATTTTGACGTACTGGTCACGATCGCTCCTGGTTTGCTCGTGGTAGAAGCCCAGGGCATGATTCAGCTCATGTTGAACGATGCCATTGTACACACAGCCGTACCTGTTGAGGGAGACCACCTGTTTGCCACCAGTTCTACCTAGAGAAGAGTAGCACCCATCTTTGTTCTCAATACTGATGTAGTCAGTCTGAGATGATCTGGCCACAAAGCGGATGCAGGTTTTGGCATGAAAGGTGGACATGGCGTTCGCAATCACTGATCTGTCATAATAGGAGAATTCAGCGCTCACTATGTAAGGGACCTCCACTATGTTGTTAGAGTTTTTCTTCCAGAAACAGTTGTTGTTAAAGCAGAAGAGAGCATTTCTGGTTTTGGGAAACACCAGATCTCCTTCAATCAAGATTTCAGTAGATCCATTGTTGGTGTCCAAAATTCTTGTAGTGATGTCCATAGTTTCAGGCTCTGATACAAATACGCCTTCAAACCTCTTCTCCATGAGAGGAGACGCCTGGGAGACGCCAAACAGCAGCAGCAGAACGGAGAGGGAGGCTCTTGTGTCCATGTTGCCTCAGTGTGTAGAGATGTTCAGGATGCTCCTGTGCTGAGGTCTGATGTCTGTGAGCTGTTCTGTCTGGACTTTATATTCACCTGAGTAGGTGGCTCTACTGGGGGATTATGGGTAGGATCTTAGTGTCCAGAGTCTAAAATGTGTGCCTAAAGGGAGGAAACTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU178353 lncRNA downstream 8741 26497 ~ 26977 (+) True G157078
TU178354 lncRNA downstream 22693 40449 ~ 40692 (+) True G157079
TU178355 lncRNA downstream 23606 41362 ~ 41576 (+) True G157080
TU178404 lncRNA downstream 135850 153606 ~ 153885 (+) True G157127
TU178406 lncRNA downstream 140156 157912 ~ 158188 (+) True G157129
CI01000030_00023913_00029855.mRNA mRNA downstream 6157 23913 ~ 30535 (+) True CI01000030_00023913_00029855
CI01000030_00476829_00484029.mRNA mRNA downstream 459073 476829 ~ 484029 (+) True CI01000030_00476829_00484029
CI01000030_00753779_00759287.mRNA mRNA downstream 735975 753731 ~ 759320 (+) True CI01000030_00753779_00759287
CI01000030_00760361_00762546.mRNA mRNA downstream 742605 760361 ~ 762817 (+) True CI01000030_00760361_00762546
CI01000030_00811105_00836626.mRNA mRNA downstream 793349 811105 ~ 836748 (+) True CI01000030_00811105_00836626
TU178385 other downstream 98400 116156 ~ 146853 (+) True G157108
TU178522 other downstream 309893 327649 ~ 356483 (+) True G157227
TU178650 other downstream 985521 1003889 ~ 1006687 (+) False G157332
TU178651 other downstream 985521 1003889 ~ 1006687 (+) True G157332
TU179078 other downstream 1619111 1636867 ~ 1638227 (+) True G157726

Expression Profile