Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00001252 |
| length | 562 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 8 |
| gene id | XLOC_000764 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 55752593 ~ 55777154 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006629 | lipid metabolic process | biological_process |
| GO:0042761 | very long-chain fatty acid biosynthetic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-5154 | Predicted to enable oxidoreductase activity. Predicted to be involved in very long-chain fatty acid biosynthetic process. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Is expressed in several structures, including digestive system; eye; forebrain; musculature system; and solid lens vesicle. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human TECR (trans-2,3-enoyl-CoA reductase). |
| ensembl_id | ENSDART00000134770 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003235 | lncRNA | upstream | 23559 | 55714918 ~ 55729126 (+) | True | XLOC_000760 |
| TCONS_00003236 | lncRNA | upstream | 31270 | 55717578 ~ 55721415 (+) | True | XLOC_000761 |
| TCONS_00003234 | lncRNA | upstream | 73238 | 55678912 ~ 55679447 (+) | True | XLOC_000758 |
| TCONS_00003233 | lncRNA | upstream | 85325 | 55666862 ~ 55667360 (+) | True | XLOC_000757 |
| TCONS_00003231 | lncRNA | upstream | 275550 | 55456363 ~ 55477135 (+) | False | XLOC_000745 |
| TCONS_00003237 | lncRNA | downstream | 640028 | 56416638 ~ 56556305 (+) | True | XLOC_000768 |
| TCONS_00003238 | lncRNA | downstream | 784616 | 56561226 ~ 56604170 (+) | False | XLOC_000772 |
| TCONS_00003239 | lncRNA | downstream | 784643 | 56561253 ~ 56604352 (+) | True | XLOC_000772 |
| TCONS_00003240 | lncRNA | downstream | 786217 | 56562827 ~ 56564352 (+) | True | XLOC_000773 |
| TCONS_00003241 | lncRNA | downstream | 792904 | 56569514 ~ 56603810 (+) | True | XLOC_000774 |
| TCONS_00001250 | mRNA | upstream | 5682 | 55730205 ~ 55747003 (+) | True | XLOC_000763 |
| TCONS_00001249 | mRNA | upstream | 24227 | 55723870 ~ 55728458 (+) | True | XLOC_000762 |
| TCONS_00001248 | mRNA | upstream | 45349 | 55703120 ~ 55707336 (+) | True | XLOC_000759 |
| TCONS_00001247 | mRNA | upstream | 84295 | 55662491 ~ 55668390 (+) | False | XLOC_000757 |
| TCONS_00001246 | mRNA | upstream | 106272 | 55643198 ~ 55646413 (+) | True | XLOC_000756 |
| TCONS_00001255 | mRNA | downstream | 403806 | 56180416 ~ 56184928 (+) | True | XLOC_000765 |
| TCONS_00001256 | mRNA | downstream | 453064 | 56229674 ~ 56266731 (+) | True | XLOC_000766 |
| TCONS_00001257 | mRNA | downstream | 498003 | 56274613 ~ 56320569 (+) | True | XLOC_000767 |
| TCONS_00001258 | mRNA | downstream | 670497 | 56447107 ~ 56458037 (+) | True | XLOC_000769 |
| TCONS_00001259 | mRNA | downstream | 686884 | 56463494 ~ 56468601 (+) | True | XLOC_000770 |
| TCONS_00001233 | other | upstream | 455434 | 55293625 ~ 55297251 (+) | False | XLOC_000739 |
| TCONS_00001221 | other | upstream | 624106 | 55128465 ~ 55128579 (+) | True | XLOC_000733 |
| TCONS_00001186 | other | upstream | 1566529 | 54186039 ~ 54186156 (+) | True | XLOC_000710 |
| TCONS_00001180 | other | upstream | 1691475 | 54053104 ~ 54061210 (+) | True | XLOC_000705 |
| TCONS_00001166 | other | upstream | 2364804 | 53387765 ~ 53387881 (+) | True | XLOC_000690 |
| TCONS_00001304 | other | downstream | 1571288 | 57347898 ~ 57355033 (+) | False | XLOC_000813 |
| TCONS_00001335 | other | downstream | 2383541 | 58160151 ~ 58173589 (+) | True | XLOC_000837 |
| TCONS_00001394 | other | downstream | 3354682 | 59131292 ~ 59131406 (+) | True | XLOC_000888 |
