RNA id: TU191811


Basic Information

Item Value
RNA id TU191811
length 208
lncRNA type sense_over
GC content 0.33
exon number 1
gene id CI01000033_01244910_01251102
representative True

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 1244635 ~ 1251102 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAAAACATTCATGTTTTCTTAATGCCATTTATATTTTTTCCTTTTTTAAGTTGGTATGCACTCGATTTGAGCTATTTCAGATGTAAAATTGTTCCTTCAAGATCCTCCTCCTGTGTCGCATTATTCCACCACAGTTCTATTGAACCAATGTAGTTCACACAATGAATGTGTAAATTATACAGTACATCCTTTCAAAATTATGCATCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191779 lncRNA downstream 44261 1200340 ~ 1200585 (-) True G168843
TU191776 lncRNA downstream 47052 1197499 ~ 1197794 (-) True G168840
TU191770 lncRNA downstream 55599 1189011 ~ 1189247 (-) True G168834
TU191714 lncRNA downstream 125576 1106964 ~ 1114763 (-) True G168783
TU191715 lncRNA downstream 128906 1106964 ~ 1115940 (-) True G168783
TU191814 lncRNA upstream 30833 1275886 ~ 1276171 (-) True G168868
TU191815 lncRNA upstream 31414 1276467 ~ 1277025 (-) True G168869
TU191816 lncRNA upstream 32987 1278040 ~ 1278397 (-) True G168870
TU191817 lncRNA upstream 33571 1278624 ~ 1279033 (-) True G168871
TU191823 lncRNA upstream 129691 1374744 ~ 1374973 (-) True G168877
CI01000033_01119076_01152170.mRNA mRNA downstream 92676 1118929 ~ 1152170 (-) False CI01000033_01119076_01152170
CI01000033_01086310_01093184.mRNA mRNA downstream 151662 1085799 ~ 1093184 (-) True CI01000033_01086310_01093184
CI01000033_01065312_01066129.mRNA mRNA downstream 178717 1064185 ~ 1066129 (-) False CI01000033_01065312_01066129
CI01000033_00774703_00795792.mRNA mRNA downstream 445810 774508 ~ 799036 (-) False CI01000033_00774703_00795792
CI01000033_00662958_00699643.mRNA mRNA downstream 545203 662958 ~ 699643 (-) True CI01000033_00662958_00699643
CI01000033_01255331_01259169.mRNA mRNA upstream 9917 1254970 ~ 1259179 (-) True CI01000033_01255331_01259169
CI01000033_01274093_01274303.mRNA mRNA upstream 29040 1274093 ~ 1274438 (-) True CI01000033_01274093_01274303
CI01000033_01296158_01307173.mRNA mRNA upstream 51105 1296158 ~ 1307173 (-) True CI01000033_01296158_01307173
CI01000033_01312689_01320687.mRNA mRNA upstream 67573 1312626 ~ 1320687 (-) True CI01000033_01312689_01320687
CI01000033_01324488_01329483.mRNA mRNA upstream 79195 1324248 ~ 1329500 (-) True CI01000033_01324488_01329483
TU191791 other downstream 15297 1225588 ~ 1229549 (-) True G168847
TU191119 other downstream 473255 757371 ~ 771591 (-) True G168237

Expression Profile