RNA id: TU192202



Basic Information


Item Value
RNA id TU192202
length 920
lncRNA type read_through
GC content 0.38
exon number 1
gene id G169185
representative True

Chromosome Information


Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 647858 ~ 648777 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGCTGTGAGACTAAATTAAACCAGTTAAGACCAACAAACCATCTTGTCTGGTTTAGGAATTTTTATTTTTTATTATTTATTTTTTTTGCAAGGAACTTTACTTTACTTTACTTTTTACATACAGATTTGTTATTCTAATGTATGCATGTTTTTTTTTTTTTTTTTTTTATAAAGTTTGAATTTTCACTTTTTTTTTTTTAATTGATGAGAGACAGAAAGCAATGCCAGGTGATACTGAGGGTGAGGAGAATGAATGAAAAAATATAAACTAAAGAACAAAAACATTATTCAAAAACATTTGAAAGGAACACCCATGATATCTAAAGAGGACATGATTGACTGATTGCTTTTGACAGGAAATATGTATGAATATAGTTTAGACCCCAAGAATGTTATGAAACCAGATCTCCAGTCCGCCAGATAAGACCACAAACAAGCTATCTACCAAACTGAACGAATAAAGGTGATGATAATAAGACTAAATCCCTGGAATGATTAGCTGCAGAATGGACATGTTTGTTAAATCCGGTTTGTCTATGCAGCTAAAATAGTCTCTCAAATCCAGAATCTGTGATGATCTGAAGACCAGGATCGTAAGCGCTAAATATGTTAGCCTCTGTGAAGAGCACAAAATAGTTTATCCCCAACAAAGCGTTTCAAGAATAAACCCAATTCTTAAAGTTCATGCTTCACTCAAGCAACCCCCGCCCCCCACCCCCCAAAAAAGCGCCCCATCTCTCTGATCTTGTTCCGATACTCTTTCATAGTTTCTTCTGCTTTCATCAGCACAGTCCAGACTCATCTAAAACCAGTAACTCTAGTTCAACGGCTCCTAAGTTAAGTACTGTTGGTAATTTATGGCAAGAAACCCAGTGAGAAAAAGCTACAGCAGAGTATTGGAACTGGACACAAACTCTTTGGGCCCTTTTTAGGGCTGCTGGCCACCAAACTTGGAGCTGAGTTTGTTGATCAGGGCCATGATCTTGGGGTTGCCCTGGTACTTGGCGATGTTCGCGGGGTTCTGCGCCACATCCTGGAACGCTGCCATCACCTCTGGGTCCTGGAAAATGAGAATGCATTAACAATTT

Function


GO:

id name namespace
GO:0090141 positive regulation of mitochondrial fission biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU192232 lncRNA upstream 1792 612436 ~ 613239 (+) True G169215
TU192238 lncRNA upstream 24832 589854 ~ 590199 (+) True G169221
TU192237 lncRNA upstream 26887 587903 ~ 588144 (+) True G169220
TU192189 lncRNA upstream 55790 557107 ~ 559241 (+) True G169174
TU192188 lncRNA upstream 58072 556728 ~ 556959 (+) True G169173
TU192250 lncRNA downstream 29292 678069 ~ 679148 (+) False CI01000034_00661553_00677752
TU192252 lncRNA downstream 29292 678069 ~ 678542 (+) True CI01000034_00661553_00677752
TU192218 lncRNA downstream 67378 716155 ~ 718431 (+) True CI01000034_00683973_00725610
TU192222 lncRNA downstream 83838 732615 ~ 733448 (+) True G169205
TU192220 lncRNA downstream 84978 733755 ~ 734093 (+) True G169203
CI01000034_00545816_00547683.mRNA mRNA upstream 66517 545816 ~ 548514 (+) True CI01000034_00545816_00547683
CI01000034_00520790_00525323.mRNA mRNA upstream 89458 520672 ~ 525573 (+) True CI01000034_00520790_00525323
CI01000034_00486238_00516732.mRNA mRNA upstream 97507 486238 ~ 517524 (+) True CI01000034_00486238_00516732
CI01000034_00455762_00459788.mRNA mRNA upstream 155104 455145 ~ 459927 (+) True CI01000034_00455762_00459788
CI01000034_00422322_00453621.mRNA mRNA upstream 161387 421475 ~ 453644 (+) True CI01000034_00422322_00453621
CI01000034_00661553_00677752.mRNA mRNA downstream 12776 661553 ~ 678477 (+) False CI01000034_00661553_00677752
CI01000034_00683973_00725610.mRNA mRNA downstream 35196 683973 ~ 725905 (+) False CI01000034_00683973_00725610
CI01000034_00735558_00738466.mRNA mRNA downstream 86710 735487 ~ 739475 (+) True CI01000034_00735558_00738466
CI01000034_00785411_00801907.mRNA mRNA downstream 135768 784545 ~ 802059 (+) False CI01000034_00785411_00801907
CI01000034_00821815_00825192.mRNA mRNA downstream 171818 820595 ~ 825205 (+) True CI01000034_00821815_00825192
TU192338 other downstream 320484 969261 ~ 969921 (+) True G169309
TU192400 other downstream 454763 1103540 ~ 1119019 (+) True G169357
TU192449 other downstream 501520 1150297 ~ 1193560 (+) True G169394
TU192378 other downstream 601442 1250219 ~ 1310878 (+) True G169340
TU192663 other downstream 1077733 1726510 ~ 1726632 (+) True G169586

Expression Profile