RNA id: TU194430


Basic Information

Item Value
RNA id TU194430
length 995
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G171146
representative True

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 11750 ~ 12885 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTGCCATTTCAACTACAATTCCACAGAGGCAGAAATAAGCTGCTAACCTAACTAAAACACTGGGTTTGTTAGGTTAACAAATCACACCAAAATTCTCCCTGATTATCTGTCACTGGCTAATATACATTATGCATTCAGTTTTGGAAGTATACATTTTTGCAAATCTCATTTCATACAATTTTAACATACAAAAAAATGGAAAAAAAGTGCTTACAAAATTTGTGCACAATAACATAGATAGACATATACTTAGACATAAAACAAAAGAAAACCAATACAAATATATGTCTTAAGGTAAGTTTTTAACATTAAATGTAAAACGTCATCAGTCGAACATGTAAACTCATTTACTCACTCGTCCACTTTTACAGCCTCATTGTGTTCATTATCACGATCTTGCAAGCTATTCTAACTCAAATTTTCAGGGGAAATGTTTTTGAAATAAAGACTGATAGAGTTGTCAGAAGCCTAATGGTGGTGACGTTGAAGTCATGTGACCGTGCTGTTGTTAATTTATAGCCTACATTTACTTTTTTACTTCTGTCCATTGTATTTATGCTTCCGAATAATACACTTTTCTTCAGAGCTTTTTTCTTCATTTTCCAGGTTGGCCTACAAAAATATGTCATCCCTGCAGCACAATACCTTAATTCTAAACTGGACTGGTAACCAGTAAAGAGGGGCCAGTGTAGATGAAATATGGTCCCTCTTAATAGTACCAGGCATAAATTGTCAGAGTAAATAAAACAAACAAACAAAACACATAAAAGTACCTGAGATTTCGGTGTGCTAACAGCCCAAAGCTGGAAGAAGTTACTTTTCACAACAGCATTAATCTGCTTGTCTGAACCAAAGGTAACCTTGGTGGGACCTTTAACAAATCCAGTATAGGGCTAAAAAAAATGACAATCTGTTTTCTCATGCAATTGTAAAACAGTTTAGACATTAATTTCATCAAGTTTGAATACTCCTGAAGTTACAGCTGAGCATTATCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU194412 lncRNA upstream 10305 23190 ~ 43248 (-) True G171131
TU194417 lncRNA upstream 30853 43738 ~ 44099 (-) True G171136
TU194450 lncRNA upstream 61366 74251 ~ 367683 (-) True G171164
TU194463 lncRNA upstream 156767 169652 ~ 187879 (-) True G171177
TU194495 lncRNA upstream 170139 183024 ~ 183365 (-) True G171206
CI01000034_00051315_00059354.mRNA mRNA upstream 37831 50716 ~ 59354 (-) True CI01000034_00051315_00059354
CI01000034_00071780_00082031.mRNA mRNA upstream 58659 71544 ~ 82031 (-) True CI01000034_00071780_00082031
CI01000034_00097095_00098729.mRNA mRNA upstream 84141 97026 ~ 99123 (-) True CI01000034_00097095_00098729
CI01000034_00101894_00115404.mRNA mRNA upstream 88167 101052 ~ 115404 (-) True CI01000034_00101894_00115404
CI01000034_00361018_00362033.mRNA mRNA upstream 348029 360914 ~ 362033 (-) True CI01000034_00361018_00362033
TU194534 other upstream 216519 229404 ~ 267246 (-) True G171229
TU194626 other upstream 563603 577872 ~ 584283 (-) True G171318
TU194720 other upstream 1058728 1072584 ~ 1077222 (-) True G171395
TU194733 other upstream 1298644 1318049 ~ 1318254 (-) True G171408
TU195117 other upstream 1851233 1864118 ~ 1866373 (-) True G171755

Expression Profile