RNA id: TU195072


Basic Information

Item Value
RNA id TU195072
length 366
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G171712
representative True

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1740644 ~ 1741140 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAATTTTTCTTATTTCGCTTGAATATAATTTTTTTTCATTTAGTGCTGCCCTTCAGAAGCAACAGAAAATACTTGCATGTTTCCCGGAAGACAAATTAAATACAATTTACCTTGATCTTCAAATTCCAAATGTTTTCACCCCCCATCTATTAATGCATCATGTTTTTTTTCTGGAGCATCAGTGAATGTTTGAACCTTTTTTAATAGTTGTGTTTGAGTCCCTCAGTTGTCCTCAGTGTGAAAAGATGGATCTCAAAGTCATTCAGTCACTGCTGTAAAGGGTTCAAATATGCAAAAAATGCTGGAAAACTGAAGAATCTGCAGGACCTGGAGGATTTTTCTGAAGAACAGAGCTCAGTTTAACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU195064 lncRNA downstream 29687 1710678 ~ 1710957 (-) True G171704
TU194972 lncRNA downstream 338732 1400324 ~ 1401912 (-) True G171631
TU194918 lncRNA downstream 492291 1248143 ~ 1248353 (-) True G171582
TU194908 lncRNA downstream 542374 1197978 ~ 1198270 (-) True G171572
TU194730 lncRNA downstream 613001 1126485 ~ 1127643 (-) True G171405
TU195086 lncRNA upstream 23361 1764501 ~ 1768078 (-) True G171724
TU195093 lncRNA upstream 39706 1780846 ~ 1781056 (-) True G171731
TU195113 lncRNA upstream 86456 1827596 ~ 1830627 (-) True G171751
TU195151 lncRNA upstream 112893 1854033 ~ 1855451 (-) True G171785
TU195121 lncRNA upstream 119442 1860582 ~ 1861091 (-) True G171759
CI01000034_01718736_01720031.mRNA mRNA downstream 20398 1718606 ~ 1720246 (-) True CI01000034_01718736_01720031
CI01000034_01703545_01705527.mRNA mRNA downstream 34601 1702892 ~ 1706043 (-) True CI01000034_01703545_01705527
CI01000034_01694301_01697568.mRNA mRNA downstream 42217 1694041 ~ 1698427 (-) True CI01000034_01694301_01697568
CI01000034_01684215_01687260.mRNA mRNA downstream 53384 1684177 ~ 1687260 (-) True CI01000034_01684215_01687260
CI01000034_01680053_01683539.mRNA mRNA downstream 57105 1679589 ~ 1683539 (-) True CI01000034_01680053_01683539
CI01000034_01785791_01788743.mRNA mRNA upstream 44095 1785235 ~ 1789815 (-) True CI01000034_01785791_01788743
CI01000034_01842093_01847705.mRNA mRNA upstream 99797 1840937 ~ 1847705 (-) True CI01000034_01842093_01847705
CI01000034_01957876_01995623.mRNA mRNA upstream 216736 1957876 ~ 1995816 (-) True CI01000034_01957876_01995623
CI01000034_02010544_02026521.mRNA mRNA upstream 269002 2010142 ~ 2026725 (-) True CI01000034_02010544_02026521
CI01000034_02092229_02092596.mRNA mRNA upstream 350819 2091959 ~ 2092642 (-) True CI01000034_02092229_02092596
TU194733 other downstream 422390 1318049 ~ 1318254 (-) True G171408
TU194720 other downstream 663422 1072584 ~ 1077222 (-) True G171395
TU194626 other downstream 1156361 577872 ~ 584283 (-) True G171318
TU194534 other downstream 1473398 229404 ~ 267246 (-) True G171229
TU195117 other upstream 122978 1864118 ~ 1866373 (-) True G171755
TU195220 other upstream 700681 2441821 ~ 2446293 (-) False G171835
TU195221 other upstream 700681 2441821 ~ 2446293 (-) False G171835
TU195219 other upstream 700779 2441919 ~ 2446293 (-) True G171835
TU195214 other upstream 768673 2509813 ~ 2510031 (-) True G171834

Expression Profile